Shigella boydii Sb227 (serotype 4): SBO_0076
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Entry
SBO_0076 CDS
T00301
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00470
D-Amino acid metabolism
sbo00550
Peptidoglycan biosynthesis
sbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBO_0076 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBO_0076 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
SBO_0076 (murD)
Enzymes [BR:
sbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SBO_0076 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
Precursor biosynthesis
Amino acid ligase
SBO_0076 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABB64811
ShiBASE_China:
SBO0076
UniProt:
Q326E7
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All DBs
Position
85090..86406
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AA seq
438 aa
AA seq
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MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLND
EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELSSFQLETTSSLQAVAATILNV
TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL
NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGL
PHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYL
NGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF
KNFEQRGNEFARLAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatcagggtaaaaatgtcgtcattatcggcctgggcctcaccgggctttcc
tgcgtggactttttcctcgctcgcggtgtgacgccgcgcgttatggatacgcgtatgaca
ccgcctggcctggataaattacccgaagccgtagaacgccacacgggcagtctgaatgat
gaatggctgatggcggcagatctgattgtcgccagtcccggtattgcactggcgcatcca
tccttaagcgctgccgctgatgccggaatcgaaatcgttggcgatatcgagctattctgc
cgcgaagcacaagcaccgattgtggcgattaccggttctaacggcaaaagcacggtcacc
acgctagtgggtgaaatggcgaaagcggcgggggttaacgttggtgtgggtggcaatatt
ggcctgccagcgttgatgctgcttgatgctgagtgcgaactgtacgtgctggaactgtcg
agcttccagctggaaaccacttccagcttacaggcggtggcggcgaccattctgaacgtg
actgaagatcatatggaccgctatccgtttggtttgcagcaataccgtgcggcaaaattg
cgtatttacgaaaatgcgaaagtttgtgtcgtcaatgctgatgatgccttaacaatgccg
attcgcggtgctgatgaacgctgcgtcagctttggcgtcaacatgggtgactatcacctg
aatcatcagcagggagaaacctggctgcgagtgaaaggcgagaaagtgctgaacgtgaaa
gagatgaaactttccgggcagcataactacaccaatgcgctggcagcactggcactggca
gacgcagctggtttgccgcgcgccagcagcctgaaagcgttaaccaccttcaccggtctg
ccgcatcgctttgaagtggtgctggagcacaatggcgtacgctggattaacgattcgaaa
gccactaacgtcggcagtacggaagcggcgttgaatggcttgcaggtagacggcacgctg
catttgttgctgggcggcgatggtaaatcggcggacttcagtccactggcgcgctatctg
aatggcgacaacgtgcgtttgtactgttttggtcgtgacggtgcgcagctggcggcgcta
cgcccggaagtggcagaacaaaccgaaactatggaacaggcgatgcgcttgctggctccg
cgtgttcagccgggcgatatggttctgctctccccggcctgtgccagccttgatcagttc
aagaactttgaacaacgaggcaatgagtttgcccgtctggcgaaggagttaggttga
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