Shigella boydii Sb227 (serotype 4): SBO_0496
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Entry
SBO_0496 CDS
T00301
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase, fraction A
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00550
Peptidoglycan biosynthesis
sbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBO_0496 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbo01002
]
SBO_0496 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
SBO_0496 (dacA)
Enzymes [BR:
sbo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SBO_0496 (dacA)
Peptidases and inhibitors [BR:
sbo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SBO_0496 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SBO_0496 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ABB65197
ShiBASE_China:
SBO0496
UniProt:
Q324R1
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All DBs
Position
complement(513163..514374)
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AA seq
403 aa
AA seq
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MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVL
AEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFL
KPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVH
GLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDG
IKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKV
GKEFASEPVWFSDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGT
INFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaataccattttttccgctcgtatcatgaagcgcctggcgctcaccacggctctttgc
acagcctttatctctgctgcacatgccgatgacctgaatatcaaaactatgatcccgggt
gtaccgcagatcgatgcggagtcctacatcctgattgactataactccggcaaagtgctc
gccgaacagaacgcagatgtccgccgcgatcctgccagcctgaccaaaatgatgaccagt
tacgttatcggccaggcaatgaaagccggtaaatttaaagaaactgatttagtcactatc
ggcaacgacgcatgggccaccggtaacccggtgtttaaaggttcttcgctgatgttcctc
aaaccgggcatgcaggttccggtttctcagctgatccgcggtattaacctgcaatcgggt
aacgatgcttgtgtcgccatggccgattttgccgctggtagccaggacgcttttgttggc
ttgatgaacagctacgttaacgcactgggcctgaaaaatacccacttccagacggtacat
ggtctggatgctgatggtcagtacagctccgcgcgagatatggcgctgatcggccaggca
ttgatccgtgacgtaccgaatgaatactcgatctataaagaaaaagaatttacgtttaac
ggtattcgccagctgaaccgtaacggcctgttatgggataacagcctgaatgtcgacggc
atcaaaaccggacacactgacaaagcaggttacaatcttgttgcttctgcgactgaaggc
cagatgcgcttgatttctgcggtgatgggtggacgtacttttaaaggccgtgaagccgaa
agtaaaaaactgctaacctggggcttccgtttcttcgaaaccgttaacccactgaaagta
ggtaaagagttcgcctctgaaccggtttggtttagtgattctgatcgcgcttcgttaggg
gttgataaagacgtgtacctgaccattccgcgtggtcgcatgaaagatctgaaagccagc
tatgtgctgaacagcagtgaattgcatgcgccgctgcaaaagaatcaggtcgtcggaact
atcaacttccagcttgatggcaaaacgatcgagcaacgcccgctggttgtgttgcaagaa
atcccggaaggtaacttcttcggcaaaatcattgattacattaaattaatgttccatcac
tggtttggttaa
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