KEGG   Shigella boydii Sb227 (serotype 4): SBO_1948
Entry
SBO_1948          CDS       T00301                                 
Symbol
ycfS
Name
(GenBank) conserved hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SBO_1948 (ycfS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sbo01002]
    SBO_1948 (ycfS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sbo01011]
    SBO_1948 (ycfS)
Peptidases and inhibitors [BR:sbo01002]
 Cysteine peptidases
  Family C82
   SBO_1948 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:sbo01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   SBO_1948 (ycfS)
SSDB
Motif
Pfam: Ldt_C YkuD LysM
Other DBs
NCBI-ProteinID: ABB66538
ShiBASE_China: SBO1948
UniProt: Q31ZH0
LinkDB
Position
1924164..1925126
AA seq 320 aa
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANTRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq 963 nt   +upstreamnt  +downstreamnt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttac
gtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
acccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
catggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa

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