Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101049872
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Entry
101049872 CDS
T04350
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101049872 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbq03021
]
101049872 (POLR1A)
Enzymes [BR:
sbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101049872 (POLR1A)
Transcription machinery [BR:
sbq03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101049872 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101049872
NCBI-ProteinID:
XP_003942581
UniProt:
A0A2K6U795
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRFLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLMVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
ICQLRVLEVGALQAVYELERILNRFLEENADPSASEIQEELEQYTTEIVQNNLLGSQGAQ
VKNVCESRSKLIAFFWKTHMNPKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQMGKRGYLTPTSAREQLLALWKNEGFFLNYLFSGVEDDDTESRFNPSVFFLD
FLVVPPSRYRPVSRVGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPGDVAVPPT
DEEKDSLIAIDRSFLSTLPGQSFIDKLYNIWVRLQSHVNIVFDSEMDKLMTDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSTVDVSQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLFPPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLTGKAKITGKAWVKET
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGEISGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQQIIEESIHCGPRAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDVPKTQFLQPKQFPFLASNYEAIMKSNHLHEVLSRADPKKALRHFRAIKKWQNKHP
NTLLRRGAFLSYSQKIEAAVKALNLESGNQNGRSPGTQEMLRTWYELDEHSRRKYRKKAA
SCPDPSLSVWRPDIHFASVSETFETMVDDYSQEWAAQTERSYEKSELSLERLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKRALKRVKSLKKQLTRVCLGEVLQKIDVQESLCIEEKQNKFRVYQMRFQ
FLPHACYQQEKCLRPEDILRFMETRFFKLLMESIRKKNNKASAFRNVNTRRATQRDLDNT
EQSGRSRGEQEGDEEEEGRIVDAEADEGDADASDAKRKEKQEEEVDYESEEEEEKEGEEN
DDEDTQEEGNAHGEGAQETPEQDEEMASRAEEAPSLPILLTQRRKSTHSQEPQGAEATKR
RIQAVREIHSFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHDAIVYTTRGIT
RCLLNETTNSKNEKELVLNTEGINLPELFKYAEILDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagcgttaaatccattacaaaccctcggttcctggac
agcctggggaacccatcggcaaacggcctgtatgatttagctttgggccccgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctccgggcacctgggccat
attgagctcccactcatggtgtacaaccctctcctcttcgataagctatacctgctgctt
cgggggtcttgtttaaactgccacatgctgacttgtccccgggctgtgattcacctctta
atctgccaactgagggttctggaagttggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaatgctgatccctctgcctctgaaattcaggaggaa
ttagaacaatacacaactgaaattgtgcagaacaacctcctggggtcccagggcgcacag
gtaaagaacgtgtgtgagagcaggagcaagctcattgctttcttctggaagacacatatg
aatcctaagcgctgtccccactgcaagactgggcgatctgttgtccgaaaggaacacaat
agcaagttgacaatcacgtttccagccatggtgcacaggacagctggccagaaggactcc
gagcccctgggaattgaggaagctcagatgggaaaacgaggatacttaacacccaccagt
gcccgtgaacaacttttagccctgtggaagaatgaaggattctttctgaactaccttttt
tcgggagtagaagatgatgatacggagtccagattcaaccccagtgtgttctttctagat
ttcttggtggtgccgccctcaaggtatcgcccagtcagtcgcgtgggagaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggatgtagttctgattcgaaaa
cttctggcattgatggcccaagaacagaagctaccaggggatgtggcagtaccccctaca
gatgaggaaaaagactctttgattgctattgacagatcctttctgagtacactcccaggc
cagtccttcatagacaaactttacaacatttgggttcgccttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaactaatgacggacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaagcacatgatgggaaagcgagtggactacgct
gcacgctcagtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtatttgccacaaaactgacctacccgcagccagttaccccgtggaatgttcaggaactt
agacaagcggtcatcaacggccccaacgtgcacccaggagcctccatggtcatcaatgag
gatggcagccgcacagccctgagcactgtggatgtgagccaacgagaggccgtggccaag
cagctcctgacccccgccatgggggcacctaagccccagggaacaaaaattgtgtgccgg
cacgtgaagaatggggacattctgctactgaaccgtcagcccaccctgcacagaccctcc
atccaggcccaccacgcccgcatcctgcctgaagagaaagtgctgcggctccactatgcc
aactgcaaagcctataatgctgactttgatggagatgagatgaatgcccatttcccccag
agtgagctgggccgggcggaggcctatgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccaaccattggcaggactgatccaggatcacatggtttcaggtgcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgcgtgaagctctttcctccttccatcttgaagccctttcca
ctgtggacaggaaaacaggttgtgtcaacgctgctcataaatataatcccagaggaccac
atcccactgaacttaactggaaaggcaaaaatcactgggaaagcctgggtgaaggagact
cctcgatctgttcctggctttaaccccgattcgatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagttctggacaaggcgcactacgggagctccgcctacggc
ctggtccactgctgctatgagatctacgggggtgagatcagcggcaaggttcttacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggctttaccttgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacagatcattgaagaatccatc
cactgcgggccccgggctgtcagggctgcattaaacctgccagaagctgcatcatatgat
gaggtccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggtctacacagacagttcccagagaacagcctgcagatgatggtgcaatcg
ggagccaaaggttcaactgtgaacacgatgcagatctcatgcctgctgggccagattgag
ttggaaggtcggagacccccgctgatggcgtctggcaagtcactaccctgctttgagcct
tacgagttcacccccagggctggtggttttgtcactggcagattcctcactggcatcaaa
cctcctgagttcttcttccactgcatggcaggacgagagggcctggtcgacactgctgtg
aaaaccagccgctcaggctatctccagaggtgcatcatcaagcacctggaggggctggtc
gtgcagtatgatctcacagtccgagacagcgacggcagtgtggtacagttcctgtatggg
gaggatggcctggacgtccccaagacacagttcctgcagcccaagcagttccccttcctg
gccagcaactacgaggcgataatgaaatcaaatcatctccatgaagttttatccagagct
gatcccaaaaaagctctccgccacttcagagccatcaaaaaatggcaaaacaagcacccc
aacaccctgctgagaagaggcgccttcttgagttattcccagaaaattgaggcagctgtg
aaagccctgaaccttgagagtggaaaccagaatggccgcagccccgggactcaggagatg
ctgaggacgtggtatgagttggatgagcacagccgaaggaaataccggaagaaggcggcc
agttgtcctgaccccagtctgtccgtctggcgccctgacatacactttgcatcagtgtca
gaaacgtttgaaacaatggttgatgactacagtcaagagtgggcagctcaaacagagagg
agttatgagaaatcagaactttctctcgaaaggttgaggaccttgctgcagctgaagtgg
cagcgctcgctgtgtgagccgggtgaggccgtgggtctgctggccgcccagagcatcgga
gagccctccacccagatgactctcaacaccttccactttgcaggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagattctcatggtggccagcgccaacatcaag
acacccatgatgagtgtgcccgtgctcaacaccaagagagccctgaagagagtgaaaagc
ctgaagaagcaactcaccagagtgtgcttaggggaggtattacagaaaattgacgtccag
gagtccttatgtatagaagaaaaacagaacaaattccgggtgtaccaaatgcggtttcag
tttctgccgcatgcatgttaccagcaggagaagtgcctgagacccgaggacatcctacgc
ttcatggaaacaagattctttaaacttctgatggaatccatcagaaagaagaataataaa
gcatcagccttcaggaacgtaaacactcgaagagctacgcagcgggatctggacaacact
gagcagtccgggaggagtcggggagagcaggagggcgatgaggaagaggaggggcgtatt
gtggacgctgaagctgacgagggggacgctgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggttgattatgagagtgaggaagaggaggagaaggaaggcgaggagaat
gatgatgaggacactcaggaggaagggaatgcccacggcgaaggtgctcaagagacccca
gagcaagatgaagagatggcttcacgcgctgaggaggccccatccctgcccatcctcctg
acacagcgccggaaatccacccacagccaggagccccagggggctgaggccacaaagcgc
cggatccaggctgtgcgtgagatccactcattcatagaggactaccagtatgacaccgag
gagagcctgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatg
agctccctggtagtatctttggcccatgatgccattgtctatactaccaggggcatcact
cggtgcctcctgaatgaaacgaccaacagtaagaacgagaaggagcttgtgctaaacaca
gagggaatcaacctcccagagctgttcaagtacgcggagatcctggatctgcgccgcctc
tattccaatgatatccacgccatggccaacacgtatggcatcgaggccgcactgcgggtg
atcgagaaggaaatcaaggatgtgtttgccgtgtatggcattgcagtcgaccctcgccat
ctctccctggtcgctgattatatgtgcttcgagggtgtttacaagccactgaatcgcttt
gggatccagtcaaactcttccccgctacagcagatgacatttgaaaccagcttccagttt
ctgaagcaggccaccatgctgggatcccatgatgagctgaggtctccttctgcctgcctt
gtggtcgggaaggtcgtcaagggtgggacaggcctgttcgagcttaagcagcccctgaga
tag
DBGET
integrated database retrieval system
