Gracilinema caldarium: Spica_0879
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Entry
Spica_0879 CDS
T01573
Name
(GenBank) diguanylate cyclase with TPR repeats
Organism
scd
Gracilinema caldarium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
GAF_2
TPR_12
GAF
TPR_1
GAF_3
TPR_2
TPR_7
TPR_8
TPR_9
DUF3369
Motif
Other DBs
NCBI-ProteinID:
AEJ19033
UniProt:
F8F1I0
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Position
968659..970998
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AA seq
779 aa
AA seq
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MKWYEWAIVIIVRWYTKGETSFSVSQGYVMEHNIYTELVQELNKELEIAWKLSSAHPILA
IEKVETLFHRAEELQYQKGKAWALLIKSRSAFMMSNMELANSSVNKAISMFQKDNEISSL
AEAFLIKSAISLKQGSLDKALNAATKTLEIAKSCNDILLEARAENGLGEVLLKAGAVHES
LEYLMQASSYLKKLENNFKQESSDIVFSEDEYSPADDEILNLHARLFYNLGNAFLSIGET
NNAIEHFELALESTEQNQDNTLELLIYKGLSIAYRRNGNRSKAQDLLFHAIEFAQTLQQD
LMLLELYLEQALILIEADIYPEAIETLSRVIAEGEKNRLLPLLSEAYRLRSLAYELMGDA
AAALEDYKQFHKNQEAISGEQIAQSKRDAEIIFELERSKNEAEIYRLRIVELRQHKEELE
QSNKRLHAVMEIGRVVTASLDLQEIARTVYESLSMLIDVSGFSLAQNDEAHNQIHFILFI
EAGKLHEPFTITADSKESFAAYVIKNKELIKLDNIELEYKKYVEHVSLFGDRKTKSLIFA
PFLIGGKVLGAISVQSMKERAYTDEDVELLRLVSNYIAIALENSQNHAELLRLNEALRAE
KEALEQLTKKVSRLANHDGLTGLPNRLLLGELLDKAILRAARHETMVAVFFLDLDNFKPI
NDRFGHHTGDLVLIEVAHRFKNALRAMDVIARVGGDEFVALLTDLQDFESSIVVAEKLLN
TLNDPIYIENMPCNLGVSIGIALFPKDGKQGDDLLRKADEAMYEIKRKNKNGYAFYQKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtatgagtgggctatagttattatagttagatggtatacaaagggagagact
tcattttcagtatcccaagggtatgtaatggaacataatatatatacagaactggtacag
gaactgaataaggaattggaaatagcctggaaactatctagtgctcatccgattctagca
atcgaaaaggttgaaaccctctttcatcgtgcagaagaactgcagtatcagaagggtaaa
gcttgggctctgcttataaagtcaagaagtgcttttatgatgtctaatatggaacttgct
aatagctcagttaacaaagctatttcgatgtttcaaaaagataatgaaatatcgagcctt
gctgaagcctttttaattaaatcagccatttcccttaaacaaggatccctagataaggct
ttaaacgctgctacaaaaacccttgaaatagcaaaatcctgtaatgacatactactcgaa
gctagagctgagaatggtcttggagaggttttgttaaaagcaggagcggtccatgaaagc
ttggaatatctcatgcaagcttcatcgtatcttaagaagttagaaaacaattttaaacaa
gaaagttctgatatagtattttctgaagatgaatatagccctgccgatgatgaaatatta
aatttacacgcacggcttttttataacttagggaatgcgttcctgagcattggtgaaact
aataatgccattgagcattttgagttggcccttgagtccaccgagcaaaatcaggataac
acattggaattgttaatttataaaggcctctctattgcatatcgaagaaatggaaataga
tcgaaggctcaagatcttctatttcatgcgattgaatttgcgcaaactttacagcaggat
ctaatgcttcttgaattatacctggaacaagcgctcattcttattgaggcggatatttac
ccggaggctatagaaaccctatctcgggttatagccgagggggaaaaaaatcgactcctt
ccattactgtcagaagcctaccggcttcgttccctggcctatgaattgatgggcgatgcc
gccgctgctcttgaagactataaacaatttcataaaaatcaggaagcaatttcaggagaa
caaattgcacagagtaagcgggatgcagaaatcatctttgagctggaacggtcaaaaaat
gaagcagaaatataccgactgcgtattgtggaacttcggcagcataaagaagaattagaa
cagagtaataaacggttacatgcggttatggaaattggccgggtggttaccgcatcctta
gacttacaggaaattgccagaactgtctatgaaagcctatctatgttgatagacgtctca
ggtttttccttagcccagaacgatgaggctcataaccagattcacttcatcctctttata
gaggctggaaaactccacgagccctttactattacagccgatagcaaggaaagctttgcc
gcttatgtgattaagaacaaggagcttattaagctcgataatattgagttagaatataaa
aagtatgttgaacatgtttcgctgtttggagatcgtaaaacaaaatctttgatttttgct
cccttcttaattggcggtaaggttcttggggcaattagtgtacaaagtatgaaggagcga
gcctataccgatgaagatgtagaactgttacgattggtcagcaattatattgcaatagct
ttagaaaatagccagaatcatgccgagttactaaggctcaatgaagcgttgcgtgctgaa
aaagaagctctagaacaacttactaaaaaggtgagccgtcttgcaaatcatgatggttta
acgggattgccgaatcggcttctcttgggggaattacttgataaggcaatactccgtgca
gcacggcatgaaactatggtggctgttttttttctcgatttagataactttaaaccaatc
aatgatcgcttcggtcatcatacaggtgatttagtgcttattgaagtagcccatcgattc
aaaaatgccctcagggctatggatgttattgcccgagtcgggggagatgaatttgtagct
ctactgacagatttgcaggattttgaatcttcaattgttgtagcagaaaaattattaaat
acccttaacgatcccatctatattgaaaatatgccctgtaatttaggggtatccataggg
atagctcttttccctaaggatggaaaacaaggtgacgatcttcttcggaaagcagatgaa
gcaatgtatgagattaagcgaaaaaataaaaatgggtacgctttttatcagaaaaaataa
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