Gracilinema caldarium: Spica_1096
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Entry
Spica_1096 CDS
T01573
Name
(GenBank) channel protein, hemolysin III family
KO
K11068
hemolysin III
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
scd02042
]
Spica_1096
Bacterial toxins [BR:
scd02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
Spica_1096
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Motif
Pfam:
HlyIII
Motif
Other DBs
NCBI-ProteinID:
AEJ19243
UniProt:
F8EZ12
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All DBs
Position
complement(1239666..1240352)
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AA seq
228 aa
AA seq
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MSKKPLIQNRKLPEPLPFQTPGEEIANSILHGIGALLSIAGLILLVLRANGYLGGSGGGA
LAITTFCIYTASLIIMFIASTLYHAIQHEGAKRVFRVLDHSSIYLLIAGTYTPFSLVLIR
GFWGWFLFGMEWALAITGITLHGVGNKKFKKIEVLLYILMGWAVVLQWPQVLAHISAISL
LWLIAGGFFYTIGVYWYAQKIKRGTHVTWHVFVLAGAICHWWSVWFIS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaccactaatacaaaacaggaaacttcctgaaccccttccctttcagact
ccaggagaagaaattgccaactccattttacatggtatcggggcgcttctttctattgca
gggcttattttactggtgctaagagccaatgggtatcttggtggcagcggtgggggggcg
ctggcaattacaactttctgcatctatactgcatcccttatcatcatgtttatcgcgtcc
accctctatcatgcaattcagcatgagggggcaaaacgggtatttcgagtattagatcat
agttccatctatctgttaattgcaggcacttatactccttttagtctggtcctcataaga
ggattttggggatggtttttgttcggcatggaatgggcgttagcaatcaccggcattacg
ttacatggggtgggtaataaaaaatttaaaaaaatcgaagttcttctttatatattgatg
ggttgggctgtagtccttcagtggccccaagtactggctcatatttctgccataagtctc
ctctggctcattgctggaggttttttttatacaatcggagtatattggtatgctcaaaaa
atcaaacgaggcacccatgtcacctggcatgtgtttgtccttgcaggagccatctgccac
tggtggtccgtctggtttatcagttag
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