Gracilinema caldarium: Spica_2424
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Entry
Spica_2424 CDS
T01573
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_2424
Transporters [BR:
scd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spica_2424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DUF87
AAA_29
AAA_21
AAA_22
FtsK_SpoIIIE
AAA_30
AAA_23
nSTAND3
AAA_14
AAA_5
MMR_HSR1
Zeta_toxin
T2SSE
DUF1207
DEAD
NACHT
AAA_15
AAA_33
bpMoxR
AAA_18
RsgA_GTPase
AAA_28
NB-ARC
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEJ20533
UniProt:
F8F486
LinkDB
All DBs
Position
complement(2727177..2729147)
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AA seq
656 aa
AA seq
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MSVTTKELYSIQKNSWPRFGRINLLWNVLKGWRHIYALGLAAIIGEVFFTFSSPMIVKLT
IDSVIGTAPPIICFPLSVILEPFLGKNFEGGGFLEKLVPLQTLQAWGNAPWVWQPWLRDH
LWVLGLAFAGMIFMQAFFSFIASLSVNTAAEQSAKALRDRLYHHTQHLPYETMLRSQTGD
WLQRCTSDVDTVRRFFAFEFVELFRTLALVAFVFPIMFSLSYRLTLWGSIVMPVIILFSF
YFQKMVERLFLVADEREGVLSGIVQENVTGVRVVRAFARQQYELERFGRANKGLRDQVYK
LISWLGFYWGFSSFLGLLQIALLLGAGLKLYTAGFITIGLLVLFLTYEQQVLWPVRQFGR
ILADTGKTKVALGRIAELLTLVTETDLDSTIRVPAVSYSNAGGSFHDEWARGPIEFVDVS
FSYPDGTEVLKHISFRVVPGEHVAIVGPTGSGKSTLMQLLVRFYEPNEGYITIGGRDIRT
IPKAELRKAISLVLQDSFLFGKTVRENLLAACPDANEATLIDAAQKAAFHHVAMGFQDGY
ETMVGERGVTLSGGQRQRLALARALLRTAPILILDDSLSAVDIETDHLIRGAIGKQGRGT
TTTFIVAHRLTTLAEADTILVLEDGCITAQGSHEDLIQQPGLYRRLAELQSAFMDE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcacaacaaaagaactttacagtatccaaaaaaactcgtggccccgtttcggg
cgcatcaatctcttatggaatgtcctcaagggctggcggcatatctatgcgcttggtctc
gctgcaattatcggggaagtattttttaccttttcttctccaatgatagtaaaattgacc
atagatagtgttatagggaccgcgccaccgatcatctgcttccctctgtccgttatattg
gaaccattcctcggtaaaaactttgaaggaggcggttttctcgaaaaactcgtgccgtta
cagactcttcaggcctgggggaacgcaccctgggtatggcagccctggctgagggaccat
ctgtgggtgcttggtcttgcctttgcgggcatgatttttatgcaagcctttttcagcttt
atcgcttccctgagcgttaacaccgccgcggagcaaagcgcaaaagcattgcgggatcgg
ctgtatcatcatacccagcatttaccctatgagacgatgctcagatcccagactggtgac
tggctccagcgctgcacctctgatgtggatacggtccggcgtttctttgcctttgaattc
gtagaactcttcaggaccctggctctagtagccttcgtgtttcccattatgttttccctg
agctatcggctcaccctctggggtagcatagtgatgccggtaataattctcttctctttt
tattttcagaagatggtggagcggctcttcctggtggctgatgaacgggaaggggtgctc
tcaggtattgttcaggaaaatgttaccggtgttcgggtggtacgggcctttgcacggcaa
caatatgaacttgagcgttttggcagagccaacaagggtcttcgagatcaggtatacaag
cttatcagttggcttggtttctattggggtttttccagttttctcgggcttctgcaaata
gccttactgctgggagctggacttaagctctataccgcaggattcattacgattggcctg
ctggtccttttcttaacctatgaacagcaggtactctggccggttcgtcagtttggacgg
attcttgccgatacgggaaaaaccaaggttgcccttggtcgtattgctgaattacttacc
ctcgtaacagaaacagatcttgatagcaccataagggttcctgcggtatcatactccaat
gcagggggctcctttcatgacgaatgggctagaggtcccatcgaatttgttgatgtgtcc
ttttcctatcctgatggtactgaggtacttaaacatatttcctttcgggttgttccaggg
gaacatgtagctattgtggggcctacgggcagtggaaaatccacgttaatgcagcttcta
gttcgtttttatgaaccaaacgaggggtatataacgataggggggcgggacatcagaacg
attcccaaagcggagcttcgcaaggccatatccctggtgctccaggacagctttttattt
ggaaaaacggtccgggaaaatcttttggccgcatgtcccgacgccaatgaagcaactttg
attgatgctgcacagaaagctgcctttcatcatgtcgcaatgggttttcaggatggttat
gagaccatggtcggagaacggggggtaaccctttcaggaggccagcgccagcgccttgcc
ttagctcgggcactgctcagaaccgctcctatcctcattttggatgacagcctgagcgcg
gtcgatatcgaaacggatcatcttatacgaggagccatagggaaacaaggcaggggaacg
acgacaacctttatcgtcgctcaccggcttacgaccctagcagaggcagatacgattctg
gtgcttgaagatggttgtattaccgcccagggcagtcatgaagatctgatacagcagcct
ggattatatcgccggcttgctgaactacaaagtgcgtttatggacgagtaa
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