Saccharomyces cerevisiae (budding yeast): YLR430W
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Entry
YLR430W CDS
T00005
Symbol
SEN1, CIK3, NRD2
Name
(RefSeq) DNA/RNA helicase SEN1
KO
K10706
senataxin [EC:5.6.2.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YLR430W (SEN1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
YLR430W (SEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
nSTAND3
ResIII
Motif
Other DBs
NCBI-GeneID:
851150
NCBI-ProteinID:
NP_013534
SGD:
S000004422
UniProt:
Q00416
Structure
PDB
LinkDB
All DBs
Position
XII:993434..1000129
Genome browser
AA seq
2231 aa
AA seq
DB search
MNSNNPDNNNSNNINNNNKDKDIAPNSDVQLATVYTKAKSYIPQIEQVYQGTNPNIQEAK
LLGELLQVLAEVPKGTHLFCDPILEPISIFSLTIFSFNEEATATWLKNHFNPILSVCDKC
ILNFARGKCKMLQHFAIQRHVPHEHVAKFNDIVCQWRVEAVFPILRNISVNDNTGINITN
EIETAMYECLCNPHMLRLNKQLKATFEAIFKFFYDTKHRLLDVTNPLSIKTFISGVIFCW
CEGSKEENEWSRAFLKDLYSRNFHINLSNLTPDIIEEVYIHILFLQNPANWTEIVVSQFW
SRLLPVFNLFDKDVFIEYFQVPKNVESLKKTFKFPLEPIFKMWYNHLSKSYHDKPLDFLL
RGLTMFLNKFGSEFWSKIEPFTFHSILDIIFNRDSFPIKLIKIQDNPIVEHQTEVYFQLT
GSVTDLLSWTLPFYHALSPSKRIQMVRKVSMAFLRIIANYPSLKSIPKACLMNSATALLR
AVLTIKENERAMLYKNDEFETVLLTKTDSRALLNNPLIQDIIIRSASNPNDFYPGLGAAS
ASVATSTMMVLAECIDFDILLLCHRTFKLYSGKPISEIPISTNVLENVTNKIDLRSFHDG
PLLAKQLLVSLKNINGLLIVPSNTAVAEAHNALNQKFLLLSTRLMEKFADILPGQLSKIL
ADEDASQGFWSCIFSSDKHLYQAATNILYNTFDVEGRLEGILAILNSNLTVNLKNINVML
QRLINCEFYEPCPRAVRVLMDVVSAFVDPISGVFANFQTLKSQNTEKEFLKFWESCWLFL
DTIYKFTLKWASKYDYSELENFTKDTLDLSRSLVDSFREFSDILHDQTKNLLLNVLETFK
NMLYWLRLSDEVLLESCVRLIISTSDLAHEKHVKVDDSLVEMMAKYASKAKRFSNKLTEQ
QASEILQKAKIFNKALTEEVATEAENYRKEKELSRLGKVIDLTDSVPASPSLSPSLSSTI
ASSSAESRADYLQRKALSSSITGRPRVAQPKITSFGTFQSSANAKLHRTKPVKPLSKMEL
ARMQLLNNRVVHPPSAPAFHTKSRGLSNKNDDSSSEESDNDIESARELFAIAKAKGKGIQ
TVDINGKVVKRQTAAELAKQELEHMRKRLNVDMNPLYEIILQWDYTRNSEYPDDEPIGNY
SDVKDFFNSPADYQKVMKPLLLLESWQGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYAS
VAKQVIQDCGISESDLIVMAYLPDFRPDKRLSSDDFKKAQHTCLAKVRTLKNTKGGNVDV
TLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVN
VDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNA
SSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLV
RVGRSDVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSES
GNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILA
VSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQL
PPTVLSGAASNFKYNQSLFVRMEKNSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGM
DILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKI
DFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADD
TKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGF
LDPRNNRAQSILRKFNVPVPSEQEDDYKLPMEYITQGPDEVKSNKDTKKRRVVDEGEEAD
KAVKKKKKEKKKEKKKSKADDKKKNNKKAESPSTSSGTKKKSSIFGGMSVPSAVVPKTFP
DVDSNKKAAAVVGKKKNNKHVCFSDDVSFIPRNDEPEIKVTRSLSSVLKEKQLGLKETRT
ISPPEISNNEDDDDEDDYTPSISDSSLMKSEANGRNNRVASHNQNFSASIYDDPQVSQAK
QTQVPAAITKHRSSNSVLSGGSSRILTASDYGEPNQNGQNGANRTLSQHVGNANQYSTAP
VGTGELHETLPAHPQDSYPAEAEDPYDLNPHPQPQSSAFKGPGSGPTGTRNSSRRNASSS
PFIPKKRKPRS
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaacaatcctgataataataatagcaacaacattaataataataataaggat
aaggatattgcccccaatagcgatgttcagctagctaccgtctataccaaggcaaagtct
tacattcctcagattgaacaagtttatcaaggcacaaatccaaatattcaagaggcaaaa
ttattaggggagttattacaagttctagcagaagttcccaagggtacgcatttattttgc
gaccccatacttgaaccaatatcaattttttccctaaccattttctcattcaatgaagaa
gctacggccacatggctgaagaatcattttaatccaattctctctgtttgtgataaatgc
attctaaattttgcgagagggaagtgcaaaatgttacaacattttgccattcaaagacat
gtgccgcatgaacatgtagccaagtttaatgacatcgtatgccaatggagggtggaggct
gtttttcctattcttagaaatatttccgttaacgataatacgggaattaacattacaaat
gaaattgaaactgcaatgtacgagtgtctctgtaatccgcatatgttgaggcttaacaag
caacttaaggctactttcgaagcaatcttcaaatttttctacgacacaaagcatcgtttg
ttggacgttacgaatccattaagcataaaaacctttatatcaggtgtcatattttgctgg
tgtgaaggttcaaaagaggaaaatgagtggtcacgagcttttctaaaggatttatactca
agaaatttccatataaatctttctaacctgacaccggatattattgaggaagtttatatc
catattttattcttacagaatccggcaaactggacagagattgtggtatctcaattctgg
tcgagattactaccggttttcaatttatttgataaagacgtcttcatagagtactttcag
gtcccaaaaaatgtggaatctttaaaaaaaacattcaaatttccgttagagccaattttt
aaaatgtggtacaatcacttaagcaaatcatatcatgataagccactagactttttgtta
agaggattaacaatgttcttgaataaatttggctccgagttttggtccaaaattgaaccc
ttcacattccatagcattttggatataattttcaatagagattcattcccaatcaaacta
atcaaaattcaagacaatccaattgttgagcatcaaacagaagtttactttcaacttacc
ggttctgtaaccgatttactttcttggaccttaccattttatcatgcactgtcaccatcc
aaaagaattcaaatggttagaaaggtctcaatggcgttcctgcgtataatagccaattat
ccatccctaaaatccattcccaaagcttgtttaatgaattcagcaactgccttgttgagg
gctgtgttgactattaaggaaaatgaaagggcaatgctttataagaatgatgaatttgaa
acagtactgttgactaaaacagattctagagctttgctcaacaatcctttgatccaagac
ataataattagatcagcttcgaatcctaacgacttttatcctgggctaggtgctgcttct
gcatcggtggccacatccacgatgatggtattggcagaatgtatcgattttgatatactg
ttattatgtcatcgaacgtttaagctttattcaggtaaaccaattagcgaaattccaatt
tcaaccaacgtcttggaaaatgttacaaataaaattgacctgagatcttttcatgacggt
ccattgctggccaaacagctgctagtatctttaaaaaatattaatggtcttttgatagta
ccgtcaaatactgccgtagctgaggcacacaacgcattgaatcagaagtttttgctgcta
tcaacgagattaatggaaaaatttgcggatattttgcccggtcaactgtctaaaatcctt
gcggatgaagatgcatcgcagggtttttggtcctgcatattctcctctgataaacacttg
tatcaagcagctactaatattttatacaatacatttgacgttgagggtagactggaaggt
atcttagcgattctgaatagtaatttgaccgttaacttgaagaatataaacgtgatgcta
caaagattaatcaattgtgaattctatgagccttgcccccgtgctgttcgtgttttgatg
gacgtagtgagtgcatttgtagacccgatttctggtgtgtttgctaatttccaaactttg
aagagccaaaataccgaaaaggaatttttaaaattctgggaatcatgttggttattcttg
gatacgatttataagtttactttgaaatgggcttctaaatatgactattctgaactggaa
aatttcaccaaagatactttagatctaagtcgctctttggtggactcctttagagaattt
tcagatattcttcatgaccaaacgaaaaatttacttctcaacgttttagaaacctttaag
aatatgttgtattggctgagattgagcgacgaagtacttttggaatcttgtgttagatta
attataagcacgtctgatttagcacatgaaaagcatgtgaaagtggatgattccttggta
gaaatgatggccaagtacgcctcgaaggcaaagagattttcaaataagttgacggagcaa
caggcgagtgagattctacaaaaggctaaaatattcaataaagcactcacggaagaggtc
gctacagaagctgaaaactacagaaaagaaaaggaattatcaagacttgggaaggtgatc
gacttaacggattctgtgccggcgtcaccatccctctcgccctctctgtcttcaaccatt
gctagttcttctgctgaatccagggcagactatttacaaagaaaagctttatcttcttca
ataactgggagaccaagagtagctcagcctaaaataacatcttttggtacgttccaatca
tcagctaatgctaaactgcatcgtacaaaacctgttaagcctttatccaaaatggaatta
gctaggatgcaattattaaacaacagagttgttcatccacctagtgcgccagctttccat
acaaagagtaggggtttgtctaacaaaaacgacgatagcagtagtgaggagagtgacaac
gatatagaaagcgctcgggagctttttgctattgctaaggcaaaaggcaaaggaatacaa
actgtcgatattaatggtaaggttgtcaagagacaaactgcggctgaattggctaaacag
gagttagaacatatgagaaagagattaaatgttgatatgaaccctctatatgaaatcata
ttgcaatgggattacaccagaaatagtgaatatcctgatgatgagcctattggtaattat
tctgacgtaaaggatttcttcaactctcctgctgactaccaaaaagtcatgaagccttta
ctacttctagaatcttggcaaggtctatgttcttcacgtgatagagaggactataaacct
ttcagtattattgtaggaaatcgaactgctgtgtcagatttctatgatgtgtatgcctct
gtcgctaaacaagtcatacaggattgtggtatttctgaatctgacttaattgtaatggct
tatttacccgattttcgaccagacaaaaggttgtccagtgatgatttcaagaaagcacaa
catacatgtttagcaaaggtgagaacattgaaaaataccaaaggtggtaatgttgatgtc
acattacgaattcatagaaatcattctttcagtaaatttttgacactaagatcagagata
tattgtgtgaaggttatgcaaatgacgactattgaaagagagtattcaacactggaaggg
ctggaatactatgacttagttggccaaattctacaggctaaaccatcgcctcccgtaaat
gtggatgcggcagaaattgaaacagttaagaaaagctataagctcaatacgtcgcaggct
gaggccatcgttaattcggtatctaaagaaggtttttctttaattcagggtccacctggt
acgggtaaaacaaagactatactgggtattattggttactttttgtctacaaagaatgcc
tcatcttcaaatgtcatcaaagtgccactagaaaagaactcatcgaatactgaacaactg
ttaaaaaagcaaaaaattctaatctgtgcccccagtaatgccgctgtggacgaaatctgc
ctcagactgaagagtggagtgtatgacaagcaggggcatcaatttaaacctcaattggtc
cgtgtaggtaggtcagacgttgtaaacgttgcaattaaggaccttactttagaagaactt
gtggataaaaggataggtgaaaggaattacgaaatcagaacagatccggaactagaacgt
aaatttaataatgctgtgactaaaagaagagaattgagaggaaaattagactctgagagt
ggtaatccagaaagtccaatgtcaaccgaagatatcagtaaattacaacttaagattagg
gagctaagtaaaataatcaatgaacttggccgtgatagggacgaaatgcgtgagaagaat
tccgtaaattataggaatagggatttggatagaaggaatgcacaggcccatatcttggcg
gttagtgacatcatatgttcgactttatctggttcagcccatgatgtactcgcaacaatg
ggtattaaatttgatacggtcattatagatgaagcatgtcaatgtaccgaactttcttca
attattcctctcaggtatggagggaagcgttgtattatggttggtgatcctaaccaacta
ccaccaactgttctttcaggtgcagcaagcaattttaaatacaatcagtcactgttcgtt
agaatggagaaaaatagctccccatacttgctggatgttcaataccgtatgcatccttcc
atcagtaaattcccctcttctgaattttatcagggacgactaaaagacggccctggtatg
gatatcttgaacaaaagaccctggcaccagcttgagccattagctccctacaaatttttt
gacatcattagtggtaggcaagaacaaaatgcgaagactatgtcttatacaaatatggag
gaaatacgtgttgccattgagttagttgactaccttttcagaaaattcgataataaaatt
gatttcacgggaaaaatcggtataatttcaccttatagagagcaaatgcaaaaaatgcgt
aaagagtttgcccgctattttggaggcatgatcaacaaatcaatcgatttcaatacaatc
gacggtttccaaggtcaagaaaaagaaatcatcttgatatcgtgtgtccgtgccgatgat
acgaaatctagtgtcggttttttaaaggactttcgtcgtatgaatgtggctctgactaga
gccaagacaagtatttgggttttgggacatcaaaggtctctggctaaaagcaagttatgg
agagatttgattgaagatgcaaaagatagaagttgtcttgcatatgcttgctcgggtttc
ctggatcccagaaataatagagctcaaagtattttaagaaagttcaatgtacccgtacca
tcagagcaagaagatgattataagctacccatggaatatattacgcaaggccccgatgag
gtaaaatccaataaggacacaaagaagagaagagttgtcgatgaaggtgaagaggcagat
aaagctgtaaagaaaaagaagaaagagaagaagaaggaaaagaaaaagtccaaggcagat
gataagaaaaagaataacaagaaggcagaatcgcccagcacctcatctggtacaaagaaa
aagtcatccatttttggtggaatgagtgtaccgagtgccgtagttcctaaaacttttcct
gatgtggacagcaacaaaaaggcagcagcagttgttggtaaaaagaaaaataacaaacac
gtttgtttttcggatgatgttagtttcataccaagaaatgacgaacctgaaattaaagtg
accagaagtttatcctctgtattgaaggaaaagcagttaggtttgaaggagacgagaaca
atttctccgcctgaaatcagtaataatgaggatgatgatgacgaagatgattatacgccg
tcaatctccgattcttcattaatgaaaagtgaagcaaatggtcgtaacaacagggtggct
tctcataaccaaaatttcagcgctagtatatacgacgatccacaagtttcgcaagcaaag
cagacgcaggtacctgctgctattacaaaacacagaagttcaaatagtgttttatccggt
ggttcttcgaggatcctgactgcttccgattacggtgaacccaatcaaaatggacagaat
ggagcaaataggaccctctctcaacatgtgggtaatgcgaatcaatactcaacggctcct
gtgggtacaggcgaactgcatgaaactctgcccgcccatccgcaagacagctatcctgct
gaggcagaagatccatatgatttaaacccccatccgcaaccacaatcttcagcattcaaa
ggacctggtagtgggcccacaggcacacgcaacagttcgagacggaatgcttcatctagc
ccatttatcccaaaaaaaagaaagcctagatcatga
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integrated database retrieval system
