Streptococcus parasanguinis FW213: Spaf_0777
Help
Entry
Spaf_0777 CDS
T02115
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03086
RNA polymerase primary sigma factor
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spaf_0777 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scf03021
]
Spaf_0777 (rpoD)
Transcription machinery [BR:
scf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spaf_0777 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DUF2316
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AFJ25780
UniProt:
I1ZL56
LinkDB
All DBs
Position
798448..799557
Genome browser
AA seq
369 aa
AA seq
DB search
MAKEQKDITTLDVQIAEFIRSHKQSGTATDDEINDQLVIPFTLDADGIEDLLQRIQDAGI
SITDKDGNPSARVLNNEEEPELSDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQEL
AILVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaacaaaaagatattacaacattggacgttcaaattgcagaatttatccgc
agtcataagcaaagtgggactgctacagatgatgaaattaatgatcagttggttattcct
ttcacactggatgcagatggtattgaagatctcctgcaaagaattcaagatgcagggatt
tcgatcactgataaagatggcaacccaagtgcgcgtgtgttgaacaatgaagaagagcca
gaattgtcagatgaagaattgcttggaagcaactctgctaaggtcaatgacccagtacgg
atgtacttgaaagaaattggggttgttcctcttttgaccaatgaggaagaacaagaatta
gccattttggtagaacaaggtgacttggaagccaagcaacgtctagctgaggctaacctt
cgtttggttgtttccattgcgaaacgctacgttggtcgtgggatgcaatttttggacttg
atccaagaagggaacatgggcttgatgaaggcggttgataagtttgactataccaaaggg
ttcaagttctccacttatgccacttggtggatccgtcaggccatcactcgtgctattgca
gaccaagcgcgtaccattcggattcctgtccatatggtggaaaccatcaataagttggtt
cgtgaacaacgcaatcttttgcaagaattgggacaagatccaacacctgaacaaattgct
gaacgcatggatatgacgccagacaaagtgcgtgaaatcttaaagattgcccaagaaccc
gtttctcttgaaaccccaatcggtgaagaggacgatagccatttgggcgattttatcgaa
gatgaagtgattgaaaatccagtagactacactacacgtgtggttctacgtgaacaattg
gatgaagttcttgataccctgacagaccgtgaagaaaatgttttgcgtcttcgttttggt
ctcgatgatggaaaaatgcggactttggaagatgtggggaaagtcttcaacgtgacccgt
gaacggatccgtcagatcgaagccaaagcccttcgcaaactccgccacccaagcagaagc
aaaccattgcgtgactttatagaggattaa
DBGET
integrated database retrieval system
