KEGG   Sphingobium chlorophenolicum: Sphch_1247
Entry
Sphch_1247        CDS       T01522                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sch  Sphingobium chlorophenolicum
Pathway
sch03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sphch_1247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sch03019]
    Sphch_1247
   03016 Transfer RNA biogenesis [BR:sch03016]
    Sphch_1247
Enzymes [BR:sch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Sphch_1247
Messenger RNA biogenesis [BR:sch03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Sphch_1247
Transfer RNA biogenesis [BR:sch03016]
 Prokaryotic type
  tRNA degradation factors
   Sphch_1247
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 BioW
Other DBs
NCBI-ProteinID: AEG48936
UniProt: F6EW57
LinkDB
Position
1:complement(1349104..1351449)
AA seq 781 aa
MFDVKKVSIELGGKTLTLETGRIARQADAAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINVIAQVLSF
DGESEPDIVAMIAASAALTLSGVPFLGPIGAARVGYKDGEYQLNPSLDEVKTGELDLVVA
ATGSAVMMVESEAKELSEDVMLGAVLFAHEASKKIVNAIIDLAEKAAKDPWDVAKGDDLE
DLKKKLKKLIGKDITAAYKLTDKSARSNALNEARAKAKAQFVADGLDAQTVMAGIKLTKK
LEAEIVRGAILKDGKRIDGRTTTQIRPIEAIVGFLPRTHGSALFTRGETQSICTTTLGTK
DAEQMIDGLNGVYYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKD
EFPYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKNFAVLS
DILGDEDHLGDMDFKVAGTEAGITTMQMDIKVAGITQEIFEVALRQAKEGRAHILGEMSK
ALSSTRTELSAHAPRIETIQIDKAKIRDVIGTGGKVIREIVAETGAKVDIDDEGIIKISS
SDTAQIEAAKKWILGIVEEAEVGKIYTGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGEELEDTRPPREPREPRGDRGDR
GDRGRGPRRDGGDRGGRGGDRGGDRGPRRDRGGDRGPRGEGGRGGDDDGGNAGLPDFLTQ
D
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgttcgatgtaaagaaggtatcaatcgagctgggcggaaagaccctcacgctcgaaacc
ggccgcattgcgcgtcaggccgacgccgccgtgctggcgacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgccaagtcggtgaaggaaggacaggacttcttcccgctgacc
gtccactatcaggaaaaatattcggccgccggtcgcattccgggcggcttcttcaagcgt
gagcgtggcgccacggaaaaggaaacgctggtttcccgcctgatcgaccgcccgatccgt
ccgctgttccccgaaggtttctataacgaaatcaacgtcatcgcccaggttctgagcttc
gacggcgaaagcgagcctgacatcgtggcgatgatcgccgcctcggccgcgctgacgctt
tccggcgttcccttcctcggccccatcggcgccgcccgcgtcggttacaaggatggcgaa
tatcagctcaacccgtcgttggacgaagtgaagaccggcgaactggacctggtcgtcgcc
gccaccggcagcgccgtgatgatggtcgaatccgaggccaaggaactgtcggaagacgtc
atgctcggcgccgttctgttcgcgcatgaagcgtcgaagaagatcgtcaacgcgatcatc
gatctcgctgaaaaggccgcgaaggatccgtgggacgtcgccaagggcgacgatctggaa
gatctgaagaagaagctcaagaagctgatcggcaaggacatcaccgccgcctacaagctg
accgacaagtcggcccgctcgaacgcgctgaacgaagcccgcgccaaggcgaaggcccag
ttcgtggccgatggcctggacgcccagaccgtcatggccggcatcaagctgaccaagaag
ctggaagcggaaatcgttcgcggcgccatcctgaaggacggcaagcgcatcgacggccgc
accaccacgcagatccgtccgatcgaggcgatcgtcggcttcctgccgcgcacccatggt
tcggcgctgttcacccgtggcgaaacgcagtccatctgcaccaccacgctgggcaccaag
gacgccgagcagatgatcgacggcctgaacggcgtctattatgaaaacttcatgctgcac
tataacttcccgccctattcggtcggtgaagtcggccgcttcggcgcgccgggccgtcgc
gaagtcggccatggcaagctggcatggcgcgccctgcacccggtcctgcccagcaaggac
gagttcccctacaccatccgcgtgctgagcgacatcaccgagtccaacggctcgtcctcg
atggcgacggtctgcggcggttcgctgtccatgatggacgcgggcgttccgctgaagcgt
ccggtgtcgggcatcgccatgggcctgatcctggaaggcaagaatttcgctgtcctcagc
gacattctgggcgacgaggatcacctcggcgacatggatttcaaggtggcgggcacggaa
gcgggcatcaccacgatgcagatggacatcaaggtcgccggcatcacgcaggaaatcttc
gaagtcgcgctgcgccaggcgaaggaaggccgcgcccacatcctgggtgagatgagcaag
gccctgtcctcgacccgcaccgagctgtcggcgcacgctccgcgcatcgagacgatccag
atcgacaaggcgaagatccgcgacgtcatcggcaccggaggcaaggtcatccgcgaaatc
gtcgcggaaaccggcgcgaaggtcgacatcgacgacgaaggcatcatcaagatcagctcg
tccgacaccgcccagatcgaagccgccaagaagtggattctcggcatcgtcgaggaagcg
gaagtcggcaagatctacaccggcaaggtcgtcaacatcgtcgatttcggcgcgttcgtg
aacttcatgggcggcaaggacggtctcgtccacgtctccgaaatgaagaatgagcgcgtg
gaaaagccgaccgacgtcgtgtcggaaggccaggaagtgaaggtcaaggttctcgaaatc
gacccgcgcggcaaggttcgcctgtcgatgcgcgtcgtcgaccaggaaaccggcgaggaa
ctggaggacacccgtcctccgcgcgaaccccgcgagcctcgcggcgaccgcggtgatcgt
ggcgaccgtggccgcggcccgcgccgtgacggcggcgaccgtggcggacgcggtggcgac
cgtggcggcgatcgcggcccgcgtcgcgaccgtggcggtgaccgtggcccgcgcggcgaa
ggcggccgtggcggcgatgacgacggcggcaacgccggtctgcccgatttcctgacccag
gactga

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