KEGG   Sphingobium chlorophenolicum: Sphch_3003
Entry
Sphch_3003        CDS       T01522                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sch  Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:sch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sch03032]
    Sphch_3003
   03400 DNA repair and recombination proteins [BR:sch03400]
    Sphch_3003
Enzymes [BR:sch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Sphch_3003
DNA replication proteins [BR:sch03032]
 Prokaryotic type
  DNA Topoisomerases
   Sphch_3003
DNA repair and recombination proteins [BR:sch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Sphch_3003
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact CaMKII_AD
Other DBs
NCBI-ProteinID: AEG50633
UniProt: F6F2H1
LinkDB
Position
2:101520..102626
AA seq 368 aa
MTKRQKRTETTETNVDPGRKKAEAGLFYASDEEPGFTRRPYRNGWRYFDTSGDRITDRSV
IERINAMAIPPAYTDVWICPDKNGHIQATGRDARGRKQYLYHPRFREMRDSSKYEHMLEF
ARSLPGIRQRIDSDMRRRGLPREKILATIIWLLEATMIRVGNIDYARQNRSYGLTTLNDR
HVRVERDEIRFRFKGKGGKLWNLKLTDRRVARIVRQSQELPGQHLFQYLDDDGERREVTS
GDVNAYLREISGSDITAKDFRTWAGTVLTALTLVEFERTDSEAAAKRNVQAAIRKVATQL
GNTPAICRRCYVHPQVIDSYLTQSLVLEIERKAKRAARSQLAGLRPEEMLVLSFLQSKHC
AAQPTASR
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacgaagcggcaaaagcgcaccgaaacgaccgaaaccaatgtcgatcccggcaggaaa
aaagcagaggcaggcctcttctacgcaagcgacgaggaaccgggcttcacccgccgcccc
tatcgcaacggctggcgctatttcgatacgagcggggaccgcatcaccgaccgcagcgtg
atcgaacggatcaacgccatggccatcccgcccgcttatacggacgtgtggatctgcccg
gacaaaaatggccatatccaggcgaccggccgcgacgcgcggggccgcaagcaatatctc
tatcacccccgcttccgggaaatgcgcgacagcagcaaatatgaacatatgctggaattc
gccagatcgctgcccggcatccgccagcggatcgacagcgacatgcgccgccggggcctg
ccccgcgaaaagatactcgcgacgatcatctggctgctggaggcgacgatgatccgcgtc
ggcaatatcgactatgcgcggcagaatcgcagctatggcctcaccacgctcaacgaccgg
catgtcagggtcgaacgcgacgaaatccgcttccgcttcaagggcaagggcggcaagctg
tggaatctgaagctgaccgaccgccgcgtcgcccgcatcgtgcggcagagccaggaactt
cctggccagcacctcttccaatatctggacgacgatggcgaacggcgcgaagtcacctcc
ggcgacgtcaacgcctatctccgcgaaatcagcggcagcgacatcacggccaaggatttc
cgcacctgggccggaacggtgttgaccgccctgaccctggtcgaattcgaaaggaccgac
agcgaagccgccgcgaaacgcaatgtgcaggccgccatccggaaggtcgcgacccaattg
ggcaacacgcccgccatatgccgccgctgctatgtccacccgcaggtgatcgacagctat
ctgacccaaagcctggtgctggaaatcgaacgcaaggcgaagcgcgccgcgcgcagccag
ctcgcgggccttcgccccgaagagatgctggtcctctccttcctgcaatcgaaacattgc
gcggcgcagccgaccgccagccgctga

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