Streptomyces collinus: B446_23645
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Entry
B446_23645 CDS
T02787
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sci
Streptomyces collinus
Pathway
sci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B446_23645 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_23645 (xseA)
Enzymes [BR:
sci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
B446_23645 (xseA)
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
B446_23645 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AGS71541
UniProt:
S5V0M6
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All DBs
Position
complement(5425083..5426303)
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AA seq
406 aa
AA seq
DB search
MNTSPDTPLPVGEVSRMIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG
VTCYRQVFDAVADVVGEGARVVVLAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK
ALAAEGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQGV
HAVPQVVQAVKELDAREDVDVIVVARGGGSVEDLLPFSDEQLVRAVAECRTPVVSAIGHE
PDNPLLDHVADLRASTPTDAAKKVVPDVGEELERVRMLRDRARRCVHAAVEREERGLAHA
LARPSMEDPHRMLDERADHVASLLDRGRRTLGHLLDRADSELTHTHARVVALSPAATLRR
GYAVLQRADGHVVRDPAGVAAGETLRARVAEGEFTVRVDTVDDVDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacgtcgcccgacacaccgctgcccgtcggtgaggtctcccggatgatcgggggc
tggatcgaccggctcggcgcggtgtgggtcgaggggcagatcacgcagttgtcgcggcgg
ccgggcgcgggggtggtgttcctgaccctgcgggacccgtcgcacgacatctccgtcggc
gtgacctgctaccgccaggtgttcgacgccgtcgccgacgtcgtcggcgagggtgcccgg
gtcgtggtgctggcgaaaccggagtggtacgcgccgcgcgggcagctctccctgcgggcc
gcggagatacggccggtgggtgtcggtgagctgctggcccgcctggagcagctcaagaag
gcgctggcggccgaggggctgttcgcgccggagcgcaagaagccgctgccgttcctgccg
cagctcatcgggctggtgtgcggccgtgcctccgcggccgagcgtgacgtgctggagaac
gcccggcaccgctggcccgccgtccgcttcgaggtgcgcaacgtggccgtgcagggcgtg
cacgccgtcccgcaggtggtccaggccgtcaaggagctggacgcacgggaggacgtggac
gtcatcgtcgtcgcccggggcggcggcagcgtggaggacctgctgcccttctccgacgag
cagctcgtgcgggccgtggccgagtgccgtacgccggtggtctcggccatcgggcacgag
ccggacaacccgctgctcgatcatgtcgccgacctgcgcgcctccacgccgaccgacgcg
gccaagaaggtggtgccggacgtcggcgaggagctcgagcgggtgcggatgctccgggac
cgggcccggcggtgtgtgcacgcggccgtggagcgggaggagcggggtctggcgcacgcg
ctggcgcggccgtccatggaggacccgcaccggatgctcgacgagcgcgcggaccacgtg
gcgtccctgctggaccgtggccggcgcaccctggggcacctgctggaccgcgccgactcg
gagctgacgcacacgcacgcgcgcgtggtggccctgtcgcccgccgccacgctgcggcgc
ggctacgcggtgctccagcgggcggacgggcacgtggtgcgcgacccggccggggtggcg
gccggcgagacgctgcgcgcgcgggtcgccgagggcgagttcactgtccgtgtcgatacc
gtcgacgacgtcgatgtctag
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