Spiroplasma cantharicola: SCANT_v1c03560
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Entry
SCANT_v1c03560 CDS
T04084
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scj
Spiroplasma cantharicola
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scj03016
]
SCANT_v1c03560 (truB)
Enzymes [BR:
scj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCANT_v1c03560 (truB)
Transfer RNA biogenesis [BR:
scj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCANT_v1c03560 (truB)
Prokaryotic type
SCANT_v1c03560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
bPH_1
GvpO
Motif
Other DBs
NCBI-ProteinID:
ALD66266
UniProt:
A0A0M4JI88
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All DBs
Position
415988..416908
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AA seq
306 aa
AA seq
DB search
MNGKSGVLLVRKPEGITSNDLIQNVKKKFNIKKIGHAGTLDPLATGLMVILINQATKISN
YILSSDKSYIVTMKLFIHTDSQDITGKVVQEEEYRKISKSLVKEIVAKYNGYIYDQYPPI
YSAVKVDGRKLYEYARKQQDVEIRPKKVTIKECSLIDFNQKLGTIKLNVRCSKGTYIRSL
VSDFAKDLETIATVIQLERTSSGGLNLSEAKELEEIEQKDLMSMYDALMKNDHTLIEYHR
IRDIKQGKAISLSGINYPIIFIINDSKDVMAIYKHIAHDLYKCQRGLWDEIPLDQLTEAE
RNGYYD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaaatcaggagtgcttttagtgcgcaaaccagaaggaattacttctaatgat
ttaattcaaaatgtaaagaaaaaatttaatataaaaaaaattggccatgcaggaacttta
gatcctctagcaacaggattaatggtaattttaataaatcaagcaacaaagatttcaaat
tatattttgagcagtgataagagttatattgtgacaatgaaattatttatacacactgat
tcacaagatattacaggtaaagttgttcaagaagaagaatatcgaaaaatttcaaagtct
ttagtaaaagaaattgttgctaagtataacggctatatttatgatcaatatccaccaatt
tactcagctgtaaaagttgatggaagaaagttatatgaatatgcaagaaaacaacaagat
gttgaaattagacccaagaaagttactattaaagaatgtagtttaatagattttaatcaa
aaattaggaacaattaaattaaatgtcagatgtagtaagggaacttatattcgaagtttg
gtttcagattttgcaaaggatttagaaactatagccacagttattcaattagaaagaaca
tcttcgggtggtttaaacttaagtgaagcaaaagaacttgaagaaatagaacaaaaagat
ttaatgagtatgtatgatgcattaatgaaaaatgatcatactttaattgaatatcataga
attagagatattaaacaaggtaaggcaattagcttgagtggtattaactatccaataatt
tttattattaatgattctaaagacgtgatggcaatttataaacatattgcccatgatcta
tataaatgtcaaagaggtttatgagatgaaattcctttggatcagctaacagaagctgaa
aggaatggatattatgattaa
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