Sorangium cellulosum So ce56: sce0190
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Entry
sce0190 CDS
T00634
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sce0190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce0190
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sce0190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
THDPS_N_2
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAN90347
UniProt:
A9GLY8
LinkDB
All DBs
Position
complement(257139..258479)
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AA seq
446 aa
AA seq
DB search
MRFRPSLSTSESESSHPVSIASAGGRAGERAPARRAKAAGAQATLGATELYFRALAGSQP
LTREGEVAIGRRIEAGALACFEAWVRSPVALRELASTAEDVQVGALSLRDLLCEADAGDP
EADASAKRLAELLTLARSLLGRQITEDGVETALAGLAAGLAELRLDPTFEERIERSLRAA
AAEADKAERAAIEATIAAIARGRRAVAQAKSELVQANLRLAVAIAREHQRFGVPLLDLVQ
EGNLGLIRAADKFEYRRGHRFGTYAAWWIKQAIKRTILNQGKPVRMPVHLTAIRSQVVRA
RRDLVQERGREPSVEEIAERSGLTVEKVRVISELALEPLSLDAPVGEEGDTRYGDLLAND
EPTPADMLARRRLIEQTRELLDSLQPRERELLRRRFGLDGNEDETLEEIGQSFSLTRERI
RQIEAKLLEKLRTRSRQRELGSYLEG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaggttccgtccctcgctctcgacgagcgagtccgaatcgagtcatcccgtttccatc
gcttccgcgggcggacgcgcgggcgagcgcgcgccagctcggcgcgcgaaggccgccggc
gcgcaagccacgctcggcgcgaccgagctctacttccgggcgctcgccggcagccagccg
ctgacgcgcgagggcgaggtcgcgatcggccgtcgtatcgaggcgggcgcgctcgcctgc
ttcgaggcgtgggtccggtcgcccgtcgcgctgcgcgagctcgcctcgacggcagaggac
gtccaggtcggggcgctgagcctccgggatctgctgtgcgaggccgacgcgggtgatccc
gaggcggacgcctccgcgaagcggctcgcggagctgctcacgctcgcccgctcgctcctc
ggccggcagatcaccgaggacggcgtggagaccgccctcgcgggcctcgccgcgggcctc
gccgagctgcgcctcgatccgaccttcgaggagcgcatcgagcggagccttcgcgcagca
gcggccgaggcggacaaggcggagcgcgccgcgatcgaggccacgatcgcggcgatcgcc
cgggggcgccgcgccgtcgcgcaggcgaagtccgagctcgtccaggcgaacctccggctc
gcggtcgccatcgcgcgggagcaccagcgcttcggcgtcccgctgctcgacctcgtgcag
gaggggaacctcggcctgatccgcgccgccgacaagttcgagtaccgccgcggccaccgc
ttcggcacctacgccgcgtggtggatcaagcaggcgatcaagcggacgatcctcaaccag
ggaaagcccgttcggatgccggtccacctcaccgcgatccggagccaggtggtgcgcgcc
cgacgagatctggtgcaggagcgggggcgcgagccttccgtcgaggagatcgcggagcgc
agcggcctcaccgtggagaaggtgcgggtgatcagcgagctcgcgctcgagccgctcagc
ctcgacgcccccgtcggcgaggagggcgatacccggtacggcgatctgctggccaacgac
gagcccacgcccgcggacatgcttgcccggcgccggctgatcgagcagacgcgcgagctg
ctcgactcgctgcagccgcgcgagcgcgagctcctgcggcgccgcttcggcctcgacggc
aacgaggacgagacgctcgaggagatcgggcagtcgttctcgctgacgcgggagcgcatc
cgtcagatcgaggcgaagctgctcgagaagctccggacgcgctcgcggcagcgagagctc
ggctcctatctcgaggggtga
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