KEGG   Sorangium cellulosum So ce56: sce0190
Entry
sce0190           CDS       T00634                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scl00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    sce0190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scl03021]
    sce0190
Transcription machinery [BR:scl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     sce0190
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 Sigma70_r1_2 THDPS_N_2 LexA_DNA_bind
Other DBs
NCBI-ProteinID: CAN90347
UniProt: A9GLY8
LinkDB
Position
complement(257139..258479)
AA seq 446 aa
MRFRPSLSTSESESSHPVSIASAGGRAGERAPARRAKAAGAQATLGATELYFRALAGSQP
LTREGEVAIGRRIEAGALACFEAWVRSPVALRELASTAEDVQVGALSLRDLLCEADAGDP
EADASAKRLAELLTLARSLLGRQITEDGVETALAGLAAGLAELRLDPTFEERIERSLRAA
AAEADKAERAAIEATIAAIARGRRAVAQAKSELVQANLRLAVAIAREHQRFGVPLLDLVQ
EGNLGLIRAADKFEYRRGHRFGTYAAWWIKQAIKRTILNQGKPVRMPVHLTAIRSQVVRA
RRDLVQERGREPSVEEIAERSGLTVEKVRVISELALEPLSLDAPVGEEGDTRYGDLLAND
EPTPADMLARRRLIEQTRELLDSLQPRERELLRRRFGLDGNEDETLEEIGQSFSLTRERI
RQIEAKLLEKLRTRSRQRELGSYLEG
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaggttccgtccctcgctctcgacgagcgagtccgaatcgagtcatcccgtttccatc
gcttccgcgggcggacgcgcgggcgagcgcgcgccagctcggcgcgcgaaggccgccggc
gcgcaagccacgctcggcgcgaccgagctctacttccgggcgctcgccggcagccagccg
ctgacgcgcgagggcgaggtcgcgatcggccgtcgtatcgaggcgggcgcgctcgcctgc
ttcgaggcgtgggtccggtcgcccgtcgcgctgcgcgagctcgcctcgacggcagaggac
gtccaggtcggggcgctgagcctccgggatctgctgtgcgaggccgacgcgggtgatccc
gaggcggacgcctccgcgaagcggctcgcggagctgctcacgctcgcccgctcgctcctc
ggccggcagatcaccgaggacggcgtggagaccgccctcgcgggcctcgccgcgggcctc
gccgagctgcgcctcgatccgaccttcgaggagcgcatcgagcggagccttcgcgcagca
gcggccgaggcggacaaggcggagcgcgccgcgatcgaggccacgatcgcggcgatcgcc
cgggggcgccgcgccgtcgcgcaggcgaagtccgagctcgtccaggcgaacctccggctc
gcggtcgccatcgcgcgggagcaccagcgcttcggcgtcccgctgctcgacctcgtgcag
gaggggaacctcggcctgatccgcgccgccgacaagttcgagtaccgccgcggccaccgc
ttcggcacctacgccgcgtggtggatcaagcaggcgatcaagcggacgatcctcaaccag
ggaaagcccgttcggatgccggtccacctcaccgcgatccggagccaggtggtgcgcgcc
cgacgagatctggtgcaggagcgggggcgcgagccttccgtcgaggagatcgcggagcgc
agcggcctcaccgtggagaaggtgcgggtgatcagcgagctcgcgctcgagccgctcagc
ctcgacgcccccgtcggcgaggagggcgatacccggtacggcgatctgctggccaacgac
gagcccacgcccgcggacatgcttgcccggcgccggctgatcgagcagacgcgcgagctg
ctcgactcgctgcagccgcgcgagcgcgagctcctgcggcgccgcttcggcctcgacggc
aacgaggacgagacgctcgaggagatcgggcagtcgttctcgctgacgcgggagcgcatc
cgtcagatcgaggcgaagctgctcgagaagctccggacgcgctcgcggcagcgagagctc
ggctcctatctcgaggggtga

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