Sorangium cellulosum So ce56: sce1748
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Entry
sce1748 CDS
T00634
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03579
ATP-dependent helicase HrpB [EC:
3.6.4.13
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
sce1748 (hrpB)
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Flavi_DEAD
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CAN91906
UniProt:
A9FJ06
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All DBs
Position
complement(2379054..2381777)
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AA seq
907 aa
AA seq
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MQPLPIDPILPDLCAALRARPSVVLEAPPGAGKTTRVPRALLDAGFAERGEILVLEPRRL
AARLSARRVAEELGERVGETVGYTMRFEEASSPATRVRFVTEGVLTRRLLVDRELRGVSA
VVLDEFHERHLAGDVALALLRRLQRGARPDLRLVVMSATLDAGPIAAFLGGPEAQPAPAA
EAERGHDTTSAGASVAPTLRAEGRMFDVAIEYLPSARVSASTHAAGDRRGPAHWGDRTLE
SLVASSVRQLIEEGLDGDVLVFLPGSAEIRRAMEACAAIAKSEDLLLLPLHGSLSAAEQD
RAVRPADRRKIILSTNVAETSVTIDGVVAVVDSGLARVAAHAPWSGLPTLRVAPIARASA
AQRAGRAGRTRPGRCLRLYTRGDLASRPEHEAPEIRRLDLAETVLELCAAGVTDLEAFGW
LEAPPAAGLAAAEALLVRLGALDEGRRVTPTGRRMLRFPAHPRQARMIVEAERRGVACDG
CTLAALVAERDLGAPSGAREPHGRRSDARHSSDLLAALQAFEEADRARFAADRLRWLGVD
PARALTVERTRKQLSRLADHRSAAPPETVEAREIAQRIAILSGYPDRVGRLRRPTSATGR
TGREVVLAAGGTAALSEASVIDEVDLVVAVDIEERSEGRSARTVVRAASAIEADWLLDLF
TDAIRDTTEAAWNAAAERVEVVRRLSYDALVLDEARPAAGAGGPLAEAAARELAAQARAK
GWRAFVKGDALDSWLLRVAFVRAHCPDAALPDVGEDAVLATLEALCDGRRSFAELRDADL
SSAVQASLGPAKARALAELAPESIVLPGGRRARLEYTAGAPPSLASRLQDFFGMAEGPRV
AGGRVPVVLHLCAPNQRPVQVTTDLSGFWARHYPAIAKELRRRYPKHAWPDDPAHAAPPS
RAPLRKA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgctgccgatcgatccgatcctccccgatctctgcgccgccctgcgcgcgcgc
ccgagcgtggtgctcgaggccccgcccggggcgggcaagacgacgcgcgtgccgcgcgcg
ctgctcgacgcgggcttcgcggagcgcggcgagatcctggtgctcgagccgcggcggctc
gcggcgcgcctgtccgcgcggcgcgtggccgaagagctcggcgagcgcgtgggcgagacc
gtgggctacacgatgcgcttcgaagaggcgtccagcccggccacgcgcgtccgcttcgtg
accgagggcgtgctgacgcggcggctcctcgtcgatcgcgagctccggggcgtgagcgcc
gtggtgctcgacgagttccacgagcggcacctcgccggcgacgtcgcgctcgcgctgctc
cggcgcctgcagcgcggcgcgcggcccgatctccgcctcgtggtgatgtccgccacgctc
gacgccgggccgatcgcggcgttcctcggcgggccggaggcgcagcccgccccggcggcc
gaggccgagcgcggccacgacaccacgtcggccggagcctcggtggcgccgaccctgcgc
gccgaggggcggatgttcgacgtcgcgatcgagtacctgccgagcgcccgggtgagcgcg
tcgacccacgccgcgggcgaccgccgcggcccggcgcactggggcgacaggacgctcgag
agccttgtcgcgtcgtcggtgcggcagctcatcgaggaggggctcgacggtgacgtgctg
gtgttcctccccggctccgcggagatcaggcgggcgatggaggcgtgcgcagccatcgcg
aagagcgaagacctgctgctccttccgctccacggctcgctgtccgcggcggagcaggat
cgcgcggtgcgccccgcggatcggcgaaagatcatcctctcgaccaacgtggccgagacc
tccgtgaccatcgacggcgtcgtcgcggtcgtcgacagcggcctcgcgcgcgtggccgcg
cacgcgccgtggtcggggttgccgacgctccgcgtcgcgcccatcgcccgcgcctccgcg
gcgcagcgcgcggggcgcgccgggcggacgcggcccggccgctgcctccggctctacacg
cgcggggatctcgcctcgcggccggagcacgaggcgcccgagatccgccggctcgacctc
gcggagacggtgctcgagctctgcgccgcgggggtcacggatctcgaggcgttcgggtgg
ctggaggcgccgcccgccgccgggctcgccgcggccgaggcgctgctcgtgcggctcggc
gcgctcgacgaggggcgccgcgtgacgccgaccggacggcggatgcttcgcttcccggcg
cacccgcgccaggcgcggatgatcgtcgaggccgagcggcgaggcgtcgcctgcgacggg
tgcaccctcgcggcgctcgtcgcggagcgcgacctcggcgcgccgtcgggcgcgcgggag
ccccatggtcggaggagcgacgcgcggcacagctccgacctgctcgccgcgctccaggcc
ttcgaggaggcggatcgtgcgcggttcgcggcggaccgcctgcggtggctgggcgtggac
ccggcgcgcgcgctcaccgtggagcggacgcgcaagcagctctcgcggctcgccgatcac
cgcagcgccgcgccgccggagaccgtcgaggcgcgcgagatcgcccagcgcatcgcgatc
ctctccggataccccgaccgggtcgggcgcctccgccggccgaccagcgcaacgggtcgg
accggacgggaggtcgtgctcgccgccggcgggactgccgcgctctccgaggcgagcgtc
atcgacgaggtcgatctcgtggtcgctgtcgacatcgaggagcgcagcgaggggcgctcg
gcgcgcacggtcgtccgggcggcgagcgcgatcgaggccgactggctgctcgacctcttc
acggacgcgatccgggacacgacggaggcggcgtggaacgccgccgcggagcgcgtcgag
gtcgtgcgccggctgtcgtacgacgccctcgtgctcgacgaggcgcggccggccgccggc
gccggcggtccgctggcggaagcggcggcgcgggagctcgcggcgcaggcgagggcgaag
gggtggcgagcgttcgtgaagggcgacgccctcgatagctggctgttgcgggtcgcgttc
gtgcgcgcgcactgccccgacgcagcgttaccggacgtgggcgaggacgcggtgctcgcc
acgctcgaggcgctctgcgacgggcgcaggagcttcgccgagctccgcgacgccgatctc
tcgagcgccgtgcaggcctcgctgggcccggcgaaggcgcgagcgctcgccgagctcgcc
cccgagtcgatcgtcctgcccggcggccggcgggcgcgcctcgagtacacggcgggcgcg
ccgccgtcgctcgcgtcccggctgcaggacttcttcggcatggcggaggggccgcgcgtc
gccggtggacgggtgcctgtcgtgctgcatctgtgcgcgccgaaccagcgccccgtgcag
gtcacgaccgatctgtcggggttctgggcgcgccactatcccgccatcgcgaaggagctc
cgccgccgctacccgaagcacgcgtggccggacgaccccgcccacgccgcgccgccctcg
cgcgcgccgctccgcaaggcctga
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