Streptomyces coelicolor: SCO5309
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Entry
SCO5309 CDS
T00085
Symbol
SC6G9.24c
Name
(RefSeq) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
sco
Streptomyces coelicolor
Pathway
sco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SCO5309 (SC6G9.24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO5309 (SC6G9.24c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SCO5309 (SC6G9.24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-GeneID:
1100749
Kitasato:
SCO5309
LinkDB
All DBs
Position
5781254..5782351
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AA seq
365 aa
AA seq
DB search
MLHVRSIWNGAISFGLVSIPIKLVNATESHSVSFRQIHTEDGGRIRYRKVCELEDREVTQ
AEIGKAYEDADGSMIPITDEDLSQLPIPTARTIEIVAFVPEDRIDPLQMGSAYYLAASGA
PAAKPYTLLREALKRSNRVAIAKFALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVA
PEGGVTVRDQELDLADALMDTLGEIDLDDLHDEYREAVEEVVAAKASGEKPPEAREEAAP
GKVLDLMAALESSVRAARESRDGEGAGPAEEAEVRSLSRRKTSSRAPKETGGKKSTSTAA
KKTAAKRAEPKKSTAKAAGSAKKTAAGSPAKGTAKKATARSTARSGDKGAAKSTAKKTAS
RRRSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgcgatccatctggaacggcgccatctccttcggcctggtcagcatcccg
atcaagctggtgaacgccaccgagagccactccgtctccttccggcagatccacacggag
gacggcggccggatccgctaccgcaaggtgtgcgaactggaggaccgcgaggtcacccag
gccgagatcggcaaggcctacgaggacgccgacggttcgatgatcccgatcaccgacgag
gacctgtcccagctgccgatcccgacggcccgcacgatcgagatcgtcgccttcgtgccc
gaggaccgcatcgatccgctccagatgggctccgcctactacctcgcggccagcggcgcc
ccggccgccaagccgtacacgctgctgcgcgaggcgctcaagcgcagcaaccgggtggcg
atcgccaagttcgcgctgcgcggccgggagcgcctgggcatgctccgggtcgtcggcgac
gccatcgcgatgcacgggctgctgtggccggacgaggtccgcgcccccgagggcgtcgcc
cccgaaggcggggtcaccgtgcgcgaccaggaactggacctcgccgacgccctcatggac
accctcggcgagatcgacctggacgacctgcacgacgagtaccgggaggccgtcgaggag
gtcgtcgccgccaaggcctccggcgagaagcccccggaggcccgcgaggaggcggcgccc
gggaaggtgctcgacctgatggcggcactggagagcagcgtgcgggcggcgcgggagtcc
cgggacggtgagggggcgggcccggcggaggaggcggaggtcaggtccctgtcgcggcgc
aagacctcgtcccgggccccgaaggagaccgggggcaagaagtcgacgtcgacggccgcg
aagaagacggcggcgaagagggcggagccgaagaagtcgacggccaaggccgccgggtcc
gcgaagaagacggcggccgggagtcctgccaagggcaccgccaagaaggccacggccagg
agcacggcccgcagcggcgacaagggcgcggccaagagcaccgccaagaagacggcgtcc
cgcaggcgcagcgcctga
DBGET
integrated database retrieval system