Streptomyces coelicolor: SCP1.224c
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Entry
SCP1.224c CDS
T00085
Symbol
dnaE
Name
(RefSeq) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03030
DNA replication
sco03430
Mismatch repair
sco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCP1.224c (dnaE)
03430 Mismatch repair
SCP1.224c (dnaE)
03440 Homologous recombination
SCP1.224c (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sco03032
]
SCP1.224c (dnaE)
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCP1.224c (dnaE)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCP1.224c (dnaE)
DNA replication proteins [BR:
sco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCP1.224c (dnaE)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCP1.224c (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
1095304
Kitasato_p1:
SCP1.224c
LinkDB
All DBs
Position
SCP1:complement(224350..227991)
Genome browser
AA seq
1213 aa
AA seq
DB search
MRLHETALGGARLVADSFVHLHNHTEYSMLDGAQKLKPMFAEVDRQGMPAVAMSDHGNMF
GAYEFQQVAKGFGSVKPIIGIEAYVAPSSRRNRRQEFWGPGGQRAVSDDGEGSKDVSGGG
RFTHMTMWATGAQGLRNLFYMSTEASYTGQFPAGKPRMDMELIAEHAEGVVATTGCPSGA
VQTRLRLNQYDEARQVASAYQDIFGKENYFLELMDHGLSIERDVREGLLRLARELSLPLL
ATNDAHYIHESQADAHDNLLCIGVGKNKADEKRFRFSGSGYYLKTAAEMRALFAELPEAC
DNTLLIAERVGSYDEVFDNVDEMPQFPDVPDGETQESWLRKEVLTGLAMRYGDPVPTEVL
ERFETEMSVIGPMGFSSYFLVVADICKYARDNGVPVGPGRGSATGSIVAYATRITELCPL
EHGLLFERFLNPERINPPDVDLDFDDRQRDKMVRYVTEKYGDEYTAMVNTFGKIKAKNAI
KDSSRILGYPFSHGERITKALPPDIMGKSIPLDGIFDPEHPRHGEAGEIRTMYENEPDVK
TVIDTARGVEGLTRGTGVHAAAVILSKTRLTDRIPLHMRASDGVKITGFDYPSCENMGLV
KMDFLGLRNLGVIDHAIENIRENRGVRLATVDPMDGDSGTVVIPLDDKKTFELLGRGDTF
GVFQLDGGGMRALLKLMEPSRFEDIAAALALYRPGPMAANAHTNYALRQNGKQEPDPIHP
ELKEVLDPILGSTHHLLIFQEQIMAIARILAGYTLGGADMLRRAMGKKKPEVLAAEWEKF
HDGMKANDYSEEAIKAIWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANYPAEYMAALL
TSVGDDKDKAGIYLADARKLGVTVLPPDVNESVAEFTAVGDDVRFGLRSVRNVGDNVIDT
VITARKTKGKFTSFADFLDKADLPALNKRAVESLIKAGAFDSLGHTRRGLCAVHETAIDA
VVPLKKAAAYGQDDLFAGLGGGTGDDGESGFGLDVRIDDGEWSRKQLLSTEREMLGMYVS
AHPLDGTEHILAAHRDTTIPDLLASGRTEGTVRLSGLITGVQNKVTKQGNAWAIVNLADR
DGTIEVLFFPAAYQLVLGALVEDSVISVQGRINDRDGAISIFGQELKVLDVTAAERNGAA
PVQLAFPYHRVNEPMVSELRRIMGAHPGESPVHLFVRGPQKTTVYLLRSTVNAATIASDI
KGSFGQDTWHGVA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcttcacgagactgctctcggaggtgctcgcctggtggctgacagctttgttcac
ctgcacaatcacaccgaatactcgatgctcgacggcgctcagaagctgaagccgatgttc
gccgaggtggaccggcagggcatgccggccgtggccatgagcgaccacggcaacatgttc
ggcgcgtacgagttccagcaggtggccaagggcttcggctcggtcaagccgatcatcggg
atcgaggcgtacgtggccccgtcctcgcgccggaaccggcggcaggagttctgggggccc
ggcggccagcgggccgtgtcggacgacggcgagggatcgaaggacgtcagtggcggtggc
cgcttcactcacatgaccatgtgggcgacgggggcgcagggcctgcggaacctcttctac
atgtccacggaagcctcctacacaggtcagttcccggcgggcaagccccgcatggacatg
gagctgatcgccgagcacgccgagggcgtcgtcgcgacgaccggatgcccgtccggcgcc
gtccagacacggctccgcctcaaccagtacgacgaagccaggcaggtcgcctccgcctac
caggacatcttcggcaaggagaactacttcctggagctgatggaccacggcctgtccatc
gagcgggacgtgcgggaagggctgctccggctggccagggagctgagccttcccctcctg
gccaccaacgacgcgcactacatccacgagagccaggccgacgcgcacgacaacctgctg
tgcatcggcgtgggcaagaacaaggccgacgagaagcggttccgcttcagcgggagcggc
tactacctgaagacggcggccgagatgcgggccctgttcgcggagctgcccgaggcctgc
gacaacacgctcctgatcgccgagcgggtcgggtcgtacgacgaggtcttcgacaacgtc
gacgagatgccgcagttccccgacgttcccgacggagagacccaggaatcgtggctgcgc
aaggaggtcctgacggggcttgccatgcggtacggcgaccccgtcccgaccgaggtcctg
gagcgcttcgagaccgagatgtcggtcatcggtcccatggggttctcctcgtacttcctc
gtggtcgcggacatctgcaagtacgcccgggacaacggcgtgccggtcggccccggccgt
ggttcggccacgggttcgatcgtcgcctacgcgacccgcatcaccgagctgtgccccctg
gagcacggtctgctcttcgagcggttcctcaaccccgagcggatcaacccgcccgacgtc
gacctcgacttcgacgaccgccagcgcgacaagatggtccggtacgtcaccgagaagtac
ggcgacgagtacaccgccatggtgaacacgttcggcaagatcaaggccaagaacgcgatc
aaggactcgtcacggatcctcggctatcccttcagccacggtgaacggatcaccaaggcg
ctgccgccggacatcatgggcaagtcgatcccgctggacgggatcttcgaccccgagcac
ccgcgtcacggcgaggccggtgagatccggacgatgtacgagaacgagccggacgtgaag
accgtcatcgacaccgccaggggcgtcgagggcctgactcgcgggaccggcgtgcacgcg
gccgccgtcatcctgtccaagaccaggctcaccgaccgcatcccgctgcacatgcgcgcc
tccgacggcgtgaagatcaccggcttcgactaccccagttgcgagaacatggggctggtc
aaaatggacttcctgggcctgcggaacctcggcgtcatcgaccacgccatcgagaacatc
cgcgagaaccgcggcgtcaggctcgccaccgtcgacccgatggacggcgacagcggcacc
gtcgtcatcccgctggacgacaagaagaccttcgaactgctcggccgcggcgacacgttc
ggtgtgttccagctcgacggcggcggcatgcgcgcgctcctcaagctgatggaaccgagc
cggttcgaggacatcgccgccgccctcgccctgtaccggcccggcccgatggccgccaac
gcgcacacgaactacgcgctgcggcagaacggcaagcaggagcccgatcccatccacccg
gaactcaaggaagtcctcgacccgatcctgggctcgacccaccacctgctcatcttccag
gagcagatcatggccatcgcccggatcctggccggctacacgctcggcggcgccgacatg
ctgcgccgcgcgatgggcaagaagaagcccgaggtcctggccgccgagtgggagaagttc
cacgacggcatgaaggccaacgactactcggaggaggccatcaaggccatctgggacgtg
atgctccccttctccggctacgccttcaacaagtcccacaccgccggctacgggctcgtc
tcctactggaccgcgtacctcaaggccaactacccggccgagtacatggcggcgctgctg
acgtccgtcggcgacgacaaggacaaggccggcatctacctggccgacgcccgcaaactc
ggcgtcaccgtcctccctccggacgtcaacgagtccgtcgccgagttcacagccgtcggc
gacgacgtgcgcttcggccttcgttccgtccgcaacgtcggcgacaacgtcatcgacacg
gtcatcacggcccggaagaccaaggggaagttcaccagcttcgccgacttcctcgacaag
gccgacctcccggccctcaacaagcgggccgtcgagtcgctcatcaaggccggcgcgttc
gactcgctggggcacacccgcaggggactgtgtgccgtgcacgagacggccatcgacgcg
gtcgtgccgctgaagaaggccgcggcctacggccaggacgacctcttcgccgggctgggc
ggcggcaccggcgacgacggggagtccggcttcggcctcgacgtgcggatcgacgacggc
gagtggtcgcgcaagcaactcctgtccaccgagcgggagatgctcggcatgtacgtctcc
gcccaccccctggacggcacggagcacattctcgccgcccaccgggacaccaccatcccc
gacctgctggcctccgggcggaccgagggaacggtgcggctctccgggctcatcaccggc
gtccagaacaaggtgaccaagcagggcaacgcctgggcgatcgtgaacctcgccgaccgt
gacggcacgatcgaggtcctcttcttccccgccgcctaccagctcgtcctgggcgccctg
gtggaggacagcgtgatctccgtccaggggcgcatcaacgaccgggacggcgccatcagc
atcttcggccaggagctcaaggtcctcgacgtgacggccgccgagcgcaacggagcagcg
ccggtccagctggcgttcccgtaccaccgcgtcaacgagccgatggtcagtgagctcagg
cggatcatgggcgcccaccctggcgagagccccgtccacctgttcgtacgcggtccgcag
aagaccacggtctacctgctccggtcgacggtgaacgcggccacgatcgcctccgacatc
aagggctccttcggtcaggacacctggcacggtgtggcatga
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integrated database retrieval system
