KEGG   Streptococcus parasanguinis ATCC 15912: HMPREF0833_10166
Entry
HMPREF0833_10166  CDS       T01545                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
scp  Streptococcus parasanguinis ATCC 15912
Pathway
scp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMPREF0833_10166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scp03019]
    HMPREF0833_10166
   03009 Ribosome biogenesis [BR:scp03009]
    HMPREF0833_10166
Enzymes [BR:scp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     HMPREF0833_10166
Messenger RNA biogenesis [BR:scp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HMPREF0833_10166
Ribosome biogenesis [BR:scp03009]
 Prokaryotic type
  rRNA helicases
   HMPREF0833_10166
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: AEH55197
UniProt: F8DFC2
LinkDB
Position
163381..164952
AA seq 523 aa
MKFNEFNLSAELLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIDVDNTVIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHIETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPEAIKRIGVQFMKEPEHVKIAAKELTTDLVDQYYIRVKEGEKFDTMTRLMDVEQPE
LAIIFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNVDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKTGQSITFVSPNEMGYLQIIENLTKK
RMKGMKPATAEEAFQAKKQVALKKIERDFEDEKIRTNFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGGGFGGKGKGSRGNGRRGDQRRDRNRRDDREG
GRRDFKRKSNKNSRDFEGKGNKRPHRTSNEKKNGFVIRNKGDK
NT seq 1572 nt   +upstreamnt  +downstreamnt
ttgaaattcaatgaatttaacttatctgctgaattattagcagaaatcgaaaaagctggc
tttgtagaagcaagccccatccaagaacaaaccattcctttggctcttgaaggaaaagat
gtcatcggccaagcgcaaacagggaccggtaaaacggctgcttttggtcttccaactttg
gagaagattgatgtcgataacacagtgattcaagctcttgttattgccccaacgcgtgaa
ttggcggttcaaagtcaggaagaactcttccgctttggacgtagtaagggtgtcaaagtt
cgctctgtctatggtggatcgagcattgaaaagcaaattaaagctttgaagtcaggtgct
cacatcgttgtgggaacacctggacgcttgctagatttgatcaagcgcaaggccttgaaa
cttaatcatattgaaacattgatcttggatgaagcagatgaaatgctcaatatgggcttc
ttggaagatatcgaagctatcattagccgtgttcccgaaacacgccaaaccttgctcttt
tcagcaacgatgccagaagccatcaaacgcatcggtgttcagtttatgaaagagccagaa
cacgttaagattgcggccaaagaattgacaactgatttggttgatcaatactatattcgt
gtcaaagagggcgaaaagtttgataccatgactcgattgatggacgtcgagcagcctgaa
cttgctatcatttttggtcggaccaaacgtcgggtcgatgagttgacgcgtggcttgaag
attcgtggtttccgggcagaagggattcacggagatttggatcaaaacaaacgtctccga
gtacttcgtgactttaaaaatgggaacgtggacgtcttggttgcaacagacgttgcggcg
cgtggtttggatatttcaggtgtgactcatgtctacaactacgatattccacaagatcca
gagagctatgttcaccggatcggacgaacaggtcgtgctgggaaaacagggcaatccatt
accttcgtttcgccaaatgaaatgggctatttgcaaatcattgagaacttgaccaaaaag
cggatgaagggaatgaaacctgcaacagcagaagaagccttccaagcgaaaaaacaagta
gcgctgaagaaaattgagcgagactttgaggatgaaaaaatccggactaactttgagaag
tttggtaaagatgctcgcaaattggctgcagaattcactcctgaagaactggctatgtat
atcttgagcttgaccgttcaagatccagacagtcttccagaagttgaaattgcgcgtgaa
aaaccattgccatttaaaccatccggtggtggctttggtgggaaaggaaaaggcagccgt
gggaatggccgtcgtggagaccaacgccgtgaccgaaatcgcagagatgaccgtgaaggt
ggacgccgtgatttcaaacgcaagtccaataaaaatagccgagactttgaaggtaaaggc
aataaacgtcctcatcgtacttctaatgaaaagaaaaatggatttgtcatccgcaacaaa
ggggataaataa

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