KEGG   Streptomyces cyaneogriseus: TU94_22175Help
Entry
TU94_22175        CDS       T03687                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
scw  Streptomyces cyaneogriseus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scw00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    TU94_22175
Enzymes [BR:scw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TU94_22175
DNA repair and recombination proteins [BR:scw03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     TU94_22175
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5197407..5198288)
Genome map
AA seq 293 aa AA seqDB search
MAPITEVEGRRVALSNLEKVLYPAAGFTKGEVLHYYATVAGVLLPHLRDRPVSFLRYPDG
PDGQLFFTKNVPPGTPEWVTTAEVDRTEGPTRMVLVQDLPSLMWAANLVTEFHTHQWVAG
APDEADRLVFDLDPGPPATVVHCCEVALWLRERLAADGIEAYAKTSGAKGLHLLAAVRGS
SSERVTEYAKALAVEAERTMPRLVVHRMTKSLRPGKVFVDWSQNAARKTTATPYTLRARA
EPTVSAPVTWEEVEGCRAAGQLAFRAGDVGPRVQDYGDLLAPLFERRRAGVLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atggcgcctatcacggaggtggaggggcggcgggtcgcgctcagcaatctggagaaggtg
ctgtatcccgcggccggcttcaccaagggggaggtactgcactactacgcgacggtcgcc
ggggtgctgctgccgcacctgcgggaccgcccggtgtccttcctgaggtatccggacggg
ccggacggccagctcttcttcaccaagaacgtgccgccgggtacgcccgagtgggtcacc
acggccgaggtggacaggacggaggggccgacgcggatggtgctggtgcaggacctgccg
agcctgatgtgggcggcgaacctcgtcaccgagttccacacccaccagtgggtggccggc
gcccccgacgaggccgaccggctggtgttcgacctcgatcccgggccgcccgcgaccgtg
gtccactgctgcgaggtggcgctgtggctgcgcgagcggctggcggccgacgggatcgag
gcgtacgccaagacctccggggccaaggggctgcatctgctggcggccgtgcgcggatcg
tcgtccgagcgggtgacggagtacgccaaggcgctcgcggtggaggcggagcggaccatg
ccgaggctcgtcgtgcaccggatgacgaagagcctgcggccggggaaggtgttcgtcgac
tggagccagaacgccgcgcggaagaccacggccaccccctacaccctgcgggcgcgggcc
gagccgacggtgtcggcgccggtgacgtgggaggaggtcgagggatgccgggcggccggg
caactggcgttccgggcgggggacgtgggaccgcgggtgcaggactacggcgacctgctc
gcgccgctgttcgagcggcggcgggcgggcgtgctgccgtga

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