KEGG   Streptomyces sp. CFMR 7: ABE83_10840Help
Entry
ABE83_10840       CDS       T04074                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
scz  Streptomyces sp. CFMR 7
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:scz00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ABE83_10840
Enzymes [BR:scz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ABE83_10840
DNA repair and recombination proteins [BR:scz03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ABE83_10840
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2737089..2737988
Genome map
AA seq 299 aa AA seqDB search
MTPITEVEGRRLSLSNLDKVLHPATGTTKGEVLHYYAATAAGAILPHLRDRPVSFLRYPD
GAGAQVFVTKNPPPGTPDWVRTTPVPRSEDPGARQVMVQDLASLMWAANLVVEFHTPQWR
ADAPEIADRMVFDLDPGSPATVVECCAVACWLRERLAADGLFAYGKTSGSKGLHLLVPLE
PAPAAEVSAYARRLAVEAEDALPDLALHRMKRALRPGKVFVDFSQNSASKTTATPYTLRA
RAEPTVSAPVTWDEIEGCRAPEALVFRADDMAGRLERYGDLLGPLLDPDRARPLPPGPG
NT seq 900 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacggaggtggaggggcggcgcctctcgctgagcaatctcgacaaggtg
ctccatccggccaccggcaccaccaagggcgaggtgctgcactactacgcggccacggcg
gcgggcgcgatcctgccccatctgcgcgaccgcccggtctccttcctgcgctatccggac
ggggccggggcgcaggtcttcgtcaccaagaatccgccgcccggtacgcccgactgggtg
cgcaccacccccgtcccccggagcgaggacccgggcgcccggcaggtgatggtccaggat
ctggcctcgctgatgtgggcggccaacctggtggtggagttccacaccccgcagtggcgg
gcggacgccccggagatcgcggaccggatggtcttcgacctggacccgggctcccccgcg
accgtcgtggagtgctgcgcggtggcctgctggctgcgggagcggctcgccgccgacgga
ctgttcgcgtacgggaagacctccggctccaaggggctgcacctgctggtcccgctggag
ccggccccggccgccgaggtgtccgcgtacgcccggcggctcgcggtggaggcggaggac
gccctgcccgacctggccctgcaccggatgaagcgcgccctgcggccgggcaaggtcttc
gtcgacttcagccagaactccgcgtcgaagaccaccgcgacgccctacaccctgcgggcc
agggccgagcccaccgtctccgcgccggtcacctgggacgagatcgaggggtgccgggcc
ccggaggcgctggtgttccgggcggacgacatggccgggcggctggagcggtacggggac
ctgctgggccccctcctcgacccggaccgggcccggcccctgccgccgggtccgggctga

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