KEGG   Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1326
Entry
GGS_1326          CDS       T02269                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
sda  Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GGS_1326 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sda03019]
    GGS_1326 (deaD)
   03009 Ribosome biogenesis [BR:sda03009]
    GGS_1326 (deaD)
Enzymes [BR:sda01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     GGS_1326 (deaD)
Messenger RNA biogenesis [BR:sda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GGS_1326 (deaD)
Ribosome biogenesis [BR:sda03009]
 Prokaryotic type
  rRNA helicases
   GGS_1326 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD DUF1924
Other DBs
NCBI-ProteinID: BAM61463
UniProt: A0A9W3ZRN5
LinkDB
Position
complement(1425377..1426996)
AA seq 539 aa
MKFTEFNLSEDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADDAIRSNFDKFKGDAIQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRDKRDGHDGSGNRDFKRKPKRNAKDFFNKEKKSSPKNTGFVIRHKGE
NT seq 1620 nt   +upstreamnt  +downstreamnt
ttgaaatttacagaatttaacttatcagaagacatccaatcagctgtcgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaggcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccaggccgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgagatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccagcacctattaaacaaatcggggtaaaattcatgaaagaccctgag
catgttcaaattaagaacaaagaattaaccaacgtgaatgttgatcaatactatgtccgt
gtgaaggaacaagaaaaatttgataccatgacacgtttgatggatgttaaccaacctgaa
ttatctattgtttttggtcggactaaacgtcgtgttgatgagattacacgtggtctaaaa
ttacgtggtttccgtgccgaaggaatccatggtgatctagaccaaaataaacgcttacgc
gttatccgtgatttcaaaaacgatcaaattgatattcttgtagccactgatgtggcagca
cgtggtcttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggccgtactggtcgtgcgggtaaatcaggtgagtcaatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctctccgcccagcaactgcagaagaggctttccaagccaagaaaaaagta
gcccttaaaaaaattgaacgtgattttgcggatgatgctattcgttctaactttgacaaa
ttcaaaggagatgctatccaattagcagctgaattcactccagaagagttggcattgtat
attttgagcttaacggttcaagatccggatagcttaccagaagtggaaattgcgcgtgaa
aaaccattaccattcaagtatgtgggtggtggccatggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgcggagaccgccgtggtggctatcgtggcgaccgtaac
agagatgagcgtgatggtgatcgtcgtcgtcaaaaacgtgataaacgtgacggtcatgat
ggcagtggcaatcgtgatttcaaacgtaaaccaaaacgtaatgctaaagattttttcaat
aaagaaaagaaatcaagccctaaaaacactggatttgtgattcgtcacaaaggtgaatag

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