Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1326
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Entry
GGS_1326 CDS
T02269
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GGS_1326 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sda03019
]
GGS_1326 (deaD)
03009 Ribosome biogenesis [BR:
sda03009
]
GGS_1326 (deaD)
Enzymes [BR:
sda01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
GGS_1326 (deaD)
Messenger RNA biogenesis [BR:
sda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GGS_1326 (deaD)
Ribosome biogenesis [BR:
sda03009
]
Prokaryotic type
rRNA helicases
GGS_1326 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF1924
Motif
Other DBs
NCBI-ProteinID:
BAM61463
UniProt:
A0A9W3ZRN5
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All DBs
Position
complement(1425377..1426996)
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AA seq
539 aa
AA seq
DB search
MKFTEFNLSEDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADDAIRSNFDKFKGDAIQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRDKRDGHDGSGNRDFKRKPKRNAKDFFNKEKKSSPKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcagaagacatccaatcagctgtcgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaggcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccaggccgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgagatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccagcacctattaaacaaatcggggtaaaattcatgaaagaccctgag
catgttcaaattaagaacaaagaattaaccaacgtgaatgttgatcaatactatgtccgt
gtgaaggaacaagaaaaatttgataccatgacacgtttgatggatgttaaccaacctgaa
ttatctattgtttttggtcggactaaacgtcgtgttgatgagattacacgtggtctaaaa
ttacgtggtttccgtgccgaaggaatccatggtgatctagaccaaaataaacgcttacgc
gttatccgtgatttcaaaaacgatcaaattgatattcttgtagccactgatgtggcagca
cgtggtcttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggccgtactggtcgtgcgggtaaatcaggtgagtcaatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctctccgcccagcaactgcagaagaggctttccaagccaagaaaaaagta
gcccttaaaaaaattgaacgtgattttgcggatgatgctattcgttctaactttgacaaa
ttcaaaggagatgctatccaattagcagctgaattcactccagaagagttggcattgtat
attttgagcttaacggttcaagatccggatagcttaccagaagtggaaattgcgcgtgaa
aaaccattaccattcaagtatgtgggtggtggccatggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgcggagaccgccgtggtggctatcgtggcgaccgtaac
agagatgagcgtgatggtgatcgtcgtcgtcaaaaacgtgataaacgtgacggtcatgat
ggcagtggcaatcgtgatttcaaacgtaaaccaaaacgtaatgctaaagattttttcaat
aaagaaaagaaatcaagccctaaaaacactggatttgtgattcgtcacaaaggtgaatag
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