Saccharophagus degradans: Sde_1371
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Entry
Sde_1371 CDS
T00335
Name
(GenBank) DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sde
Saccharophagus degradans
Pathway
sde03030
DNA replication
sde03430
Mismatch repair
sde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sde_1371
03430 Mismatch repair
Sde_1371
03440 Homologous recombination
Sde_1371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sde03032
]
Sde_1371
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_1371
Enzymes [BR:
sde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sde_1371
DNA replication proteins [BR:
sde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sde_1371
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sde_1371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ABD80633
UniProt:
Q21KZ6
LinkDB
All DBs
Position
complement(1774484..1774933)
Genome browser
AA seq
149 aa
AA seq
DB search
MTRIDFYVLSASDDKSRWQFACRLAEKAVSRGNKVLIATQDEAASRAVDELLWTQRPESF
VPHHIVGQNTDGQSSYAPTAKPPVVITHDLDDIDHHDVLVNIRTTRPEQFSRFDRLAEIV
IQQPEVLENTRQSYAFYKQRGYPVQTHKL
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatagatttttacgtactatcggccagcgacgataaaagtcgctggcaattt
gcgtgtcgcttagccgaaaaagccgtatcgcgtggcaacaaggtgttaattgcaacgcaa
gatgaagcagcgagccgcgcagtggacgaacttctctggacccagcgcccagaatcgttt
gtgccgcatcatattgttgggcagaacacagatgggcaatcctcatacgcgccaaccgct
aagcctcctgttgtgatcacccacgatttagacgatattgaccatcacgatgttttagtg
aatattcgcactacgcgcccagagcaatttagtcgtttcgacaggctcgcggaaattgta
attcaacaaccagaagtattagaaaacacacggcaaagctacgcgttttacaagcaacgt
ggctacccagtacaaacccataagctatag
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integrated database retrieval system
