Shewanella denitrificans: Sden_1455
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Entry
Sden_1455 CDS
T00344
Name
(GenBank) RNA methyltransferase TrmH, group 1
KO
K15396
tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:
2.1.1.200
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_1455
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.200 tRNA (cytidine32/uridine32-2'-O)-methyltransferase
Sden_1455
Transfer RNA biogenesis [BR:
sdn03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Sden_1455
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Methyltrn_RNA_4
Motif
Other DBs
NCBI-ProteinID:
ABE54740
UniProt:
Q12P86
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All DBs
Position
1691036..1691815
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AA seq
259 aa
AA seq
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MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPKVEPDGQSIALSAGASDILKHL
TRVDSLAEAIADCSLVIATSARSRTLDWPMLDPREAGIKLTAEALNGPVAIVFGRENNGL
SNEELQSCQFHVAIPANPEYSSLNLAQAVQIICYEARVAHLAQLAKMDDSEAAPQAAAIV
EAETAPEEPQAYPLSADLERFYTHLESTLLATGFVIKNHPGQIMMKLRRLFSRARVEEQE
MNILRGILTSIDKKIPPKE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtaatatacgtgtcgttttagttggaacatctcaccctggaaacataggctct
actgccagagcgatgaaaacaatggggttatcaaacttataccttgctgagcctaaggtt
gaacccgatggtcaatccattgcgttatcggcgggtgcgagcgacattttaaaacattta
actcgggtagactccctagccgaagccattgcagattgtagcttagtgattgccactagc
gcgcgcagtcgcaccttagattggcctatgcttgatccaagagaagcgggcattaaatta
actgccgaagcactaaatggccctgttgctatcgtgtttggccgtgaaaataatggcttg
agcaatgaagagttacaaagctgtcaatttcatgtggcgatccctgccaatccagaatac
agttcattgaatttagctcaagcggtgcagattatctgttatgaagcccgtgtcgcgcac
ttggctcaattagcgaaaatggatgactctgaagctgcgccacaagcggctgcaatcgta
gaagcagaaactgcccctgaagagccacaagcttatccattatcggcagatcttgagcgc
ttctacacacatctagagtcgacgttgttagccacaggttttgtgattaaaaaccaccca
ggccaaatcatgatgaaattgagacgtctgtttagtcgagctcgggttgaagagcaagag
atgaatatccttcgcgggatcttaacttctattgataaaaaaataccgccaaaagagtaa
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