Shewanella denitrificans: Sden_2504
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Entry
Sden_2504 CDS
T00344
Name
(GenBank) peptidase M23B
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdn01002
]
Sden_2504
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_2504
Peptidases and inhibitors [BR:
sdn01002
]
Metallo peptidases
Family M23
Sden_2504
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Sden_2504
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
Csd3_N2
OapA
Csd3_N
Big_3_5
OapA_N
Motif
Other DBs
NCBI-ProteinID:
ABE55784
UniProt:
Q12L92
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Position
complement(2987836..2989107)
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AA seq
423 aa
AA seq
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MALNLPRASLQNLPNFHKKVLMASVFFMGAALLWPSEQSFSPERIPVALDIESLLPDLST
GPVTKVAAKRQPLFEHVIETGDTLSKLFEQAGIDQKTMYKVLEADYSVLAFDTLLPGNRI
QFWQDKNGDLTKLELYFNPAHQVVFTRFDDGSFNAEEVIREGVWQNRVVGGEINGSFYVS
AKRAGLSATDIQKVESLLKNKLNFSRDLRAGDTFSILMNDQFVQGEATGSSRLEGIEIVN
GRRNITAFQHIDGNYYDEEGSGLAKAFQRIPLNKKVRLTSRFNPKRKNPVTGRVSPHNGT
DFATPIGTSVVAPGDGVVTLVTKHRYAGNYIVIEHDNKVRTRYLHLSKFLVRKGQRVTRG
QVIALSGNTGRSTGPHLHYEFHVNGRPVDVMKVDIPEASTLPNKSLEQFRALVKSRKMMM
QLG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaacttgccaagagcaagtttgcaaaacttgccaaattttcacaaaaaagta
ttgatggccagcgttttttttatgggtgcagccctattatggccatctgaacaaagcttc
tccccagaacgtattcccgtcgccttagacattgaatccctattaccggatctgagcact
gggcctgtcactaaagttgcagctaaacgtcaacctttgttcgaacatgtcatagaaact
ggcgataccttaagtaaattgtttgagcaagcgggcatagatcagaagaccatgtataag
gtgttggaggcggattacagcgtcttggcgttcgataccttattgccgggcaaccgtatt
cagttttggcaggataaaaacggcgatctgactaaactagaattgtattttaatcctgcc
catcaagtggtattcacgcgtttcgatgatggcagttttaatgccgaagaagtgatccgc
gaaggggtatggcaaaaccgtgtggttggcggtgagatcaatggctcattctatgtgtcg
gctaaacgcgcgggtttaagcgctactgatatccaaaaagttgaatctttactgaaaaat
aaactgaacttctctcgtgatttacgcgcaggcgatactttctcaatactgatgaacgat
caatttgtccaaggtgaagccacgggcagtagccgtttagaaggcatagaaattgttaat
ggtcgtcgcaatattaccgcttttcagcatatcgatggcaactattatgatgaagaaggt
tctggcttagccaaggcattccaacgaattccactgaataaaaaagtacgcctaacatca
cgtttcaaccctaagcgtaaaaatcctgtgaccggcagagtttcacctcacaatggtacc
gactttgctacccccattggcactagcgtcgtggcgccaggggatggcgtggtaacctta
gtcactaagcacaggtatgcgggcaactacatagtgatagagcatgacaacaaggtgcgt
actcgttatttgcatctatcaaagttcttagtaagaaaaggccagcgagtcactcgtggt
caagtgattgcattgtctggcaatacaggacgttcaaccggcccacaccttcattatgaa
tttcatgtcaatggccgcccggtcgatgtaatgaaagtggatataccagaagcatcgacc
ttaccgaacaagtctttagagcaatttagagccttggttaagagccgcaagatgatgatg
cagctgggatag
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