Streptomyces davaonensis: BN159_3739
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Entry
BN159_3739 CDS
T02518
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN159_3739 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdv03021
]
BN159_3739 (rpoB)
03400 DNA repair and recombination proteins [BR:
sdv03400
]
BN159_3739 (rpoB)
Enzymes [BR:
sdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN159_3739 (rpoB)
Transcription machinery [BR:
sdv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN159_3739 (rpoB)
DNA repair and recombination proteins [BR:
sdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN159_3739 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
CCK28118
UniProt:
K4R435
LinkDB
All DBs
Position
complement(4206204..4209689)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGAEAPLDAGILTVEDVISTIKYLVKLHAGETETAADNGQTIVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVDGQVSDEVDYLTADEEDRFVIAQANATLNDDMRF
TEGRVLVRRRGGEVDYVGGEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIIDEGDRVIEGQVLADGAATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADQVAPGTNVATP
VFDGAREDELAGLLNHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgcaagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttcccaacctgctcgcgctg
cagaccgagagctttgactggctgctcgggaacaccgcctggcagagtcgggtcgaggcg
gctctggagtcaggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgtttc
gagccgccgaagaacagcatcgacgagtgcaaggaccgtgacttcacgtacgcggccccg
ctcttcgtgacggccgagttcaccaacaacgagaccggcgagatcaagtctcagacggtc
ttcatgggcgacttcccgctcatgacgcacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgttcgcccggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctcggccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tccgtgaccgttctgctcaaggctctcggttggacgaccgagcagatcctggaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctgtacttcaaccccaagcgctacgacctggccaaggtcggc
cgctacaaggtcaacaagaagctgggtgcggaggctccgctggacgcgggcatcctgacc
gtcgaggacgtcatctcgacgatcaagtacctggtgaagctgcacgccggtgagaccgag
acggccgcggacaacggccagacgatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgtacgggtctggct
cgtatggagcgcgtcgtccgtgagcgcatgacgactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggtccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtctcactacggccgtatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggtcgcgtcaacgcgttcggcttcgtcgagacg
ccgtaccgcaaggtcgtcgacggtcaggtctccgacgaggtcgactacctgaccgccgac
gaggaggaccggttcgtcatcgcgcaggccaacgccacgctcaatgacgacatgcggttc
accgagggccgcgtcctggtccgccgccgtggcggcgaggtcgactacgtcggtggcgag
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgattaagtccgagtccccgctcgtcggcaccggcatggagtaccgctcc
gccgtcgacgccggcgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcatcgacgagggcgac
cgcgtcatcgagggccaggtcctcgccgacggcgcggccaccgagaacggcgagatggcg
ctgggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgttcgcgtcttcgac
cgcgaggagggcgacgagcttccccccggtgtgaaccagctggtgcgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgccacggcaacaagggcgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctcggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggacgagtgggcg
cagcgcctccaggcgatcggcgccgaccaggtcgcgccgggcacgaacgtcgcgaccccg
gtcttcgacggtgcgcgtgaggacgagctcgcgggtctgctgaaccacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgaccggtaaggcgcggctgttcgacggccgtagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcccggtcgaccggtccgtactccatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggccagcggttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgagtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaggatgtcttc
cgcgccgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system