KEGG   Streptomyces davaonensis: BN159_3739
Entry
BN159_3739        CDS       T02518                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
sdv  Streptomyces davaonensis
Pathway
sdv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sdv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BN159_3739 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdv03021]
    BN159_3739 (rpoB)
   03400 DNA repair and recombination proteins [BR:sdv03400]
    BN159_3739 (rpoB)
Enzymes [BR:sdv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BN159_3739 (rpoB)
Transcription machinery [BR:sdv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BN159_3739 (rpoB)
DNA repair and recombination proteins [BR:sdv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BN159_3739 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CCK28118
UniProt: K4R435
LinkDB
Position
complement(4206204..4209689)
AA seq 1161 aa
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGAEAPLDAGILTVEDVISTIKYLVKLHAGETETAADNGQTIVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVDGQVSDEVDYLTADEEDRFVIAQANATLNDDMRF
TEGRVLVRRRGGEVDYVGGEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIIDEGDRVIEGQVLADGAATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADQVAPGTNVATP
VFDGAREDELAGLLNHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq 3486 nt   +upstreamnt  +downstreamnt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgcaagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttcccaacctgctcgcgctg
cagaccgagagctttgactggctgctcgggaacaccgcctggcagagtcgggtcgaggcg
gctctggagtcaggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgtttc
gagccgccgaagaacagcatcgacgagtgcaaggaccgtgacttcacgtacgcggccccg
ctcttcgtgacggccgagttcaccaacaacgagaccggcgagatcaagtctcagacggtc
ttcatgggcgacttcccgctcatgacgcacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgttcgcccggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctcggccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tccgtgaccgttctgctcaaggctctcggttggacgaccgagcagatcctggaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctgtacttcaaccccaagcgctacgacctggccaaggtcggc
cgctacaaggtcaacaagaagctgggtgcggaggctccgctggacgcgggcatcctgacc
gtcgaggacgtcatctcgacgatcaagtacctggtgaagctgcacgccggtgagaccgag
acggccgcggacaacggccagacgatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgtacgggtctggct
cgtatggagcgcgtcgtccgtgagcgcatgacgactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggtccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtctcactacggccgtatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggtcgcgtcaacgcgttcggcttcgtcgagacg
ccgtaccgcaaggtcgtcgacggtcaggtctccgacgaggtcgactacctgaccgccgac
gaggaggaccggttcgtcatcgcgcaggccaacgccacgctcaatgacgacatgcggttc
accgagggccgcgtcctggtccgccgccgtggcggcgaggtcgactacgtcggtggcgag
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgattaagtccgagtccccgctcgtcggcaccggcatggagtaccgctcc
gccgtcgacgccggcgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcatcgacgagggcgac
cgcgtcatcgagggccaggtcctcgccgacggcgcggccaccgagaacggcgagatggcg
ctgggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgttcgcgtcttcgac
cgcgaggagggcgacgagcttccccccggtgtgaaccagctggtgcgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgccacggcaacaagggcgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctcggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggacgagtgggcg
cagcgcctccaggcgatcggcgccgaccaggtcgcgccgggcacgaacgtcgcgaccccg
gtcttcgacggtgcgcgtgaggacgagctcgcgggtctgctgaaccacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgaccggtaaggcgcggctgttcgacggccgtagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcccggtcgaccggtccgtactccatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggccagcggttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgagtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaggatgtcttc
cgcgccgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga

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