Sedimenticola thiotaurini: AAY24_08555
Help
Entry
AAY24_08555 CDS
T03943
Name
(GenBank) hypothetical protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AAY24_08555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_08555
Enzymes [BR:
seds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AAY24_08555
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AAY24_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AKH20392
UniProt:
A0A0F7JXI1
LinkDB
All DBs
Position
1878899..1880263
Genome browser
AA seq
454 aa
AA seq
DB search
MPPSDTELNFQRDIYSVSRLNSEVRAVLEGSFPLLWVEGEISNLARPASGHIYFTLKDPQ
AQVRCAMFRMKRQRLRFQPENGLKVLIRARVGLYEGRGEFQLVAEHMELAGEGDLQQAFD
ALKLKLQQEGLFDSSHKLPLPLLPKRIGLITSPSGAAIRDVLSVLQRRLPAVPILIYPTQ
VQGEEAPRSLVNALRLAEQRQDCDLLILTRGGGSLEDLMAFNDEAVARVIHDLTIPLISA
VGHEVDFTIADFVADRRAPTPSVAAELATPDREEVLDRINSLQRRIRLATIRHLTDSRRS
LENLTKRLERGHPGNRLQQQLQYLDDLSLRLARGIRSQLDRRLATIGLLESRLQGVIPTH
QIRRQREQFDGLSHRLILAAAANLRIKRQSLESAIGKLDTLSPLATLHRGYSITRVLPSH
ELLQQASQVQPGDELETRVMDGTLISVVSRIDSN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccccccagtgatacagaacttaatttccagcgggatatctacagtgtctcccgcctc
aacagcgaggtccgggccgtgctggagggcagctttccgctgctctgggtagagggggag
atctccaacctggcgcgccccgcctcgggccatatctatttcaccctgaaagatccccag
gcccaggtgcgctgtgccatgttccgcatgaagcgccagcgactgcgcttccagccggaa
aacggcctcaaggtactgatccgggcccgggtgggcctgtacgagggccgtggcgagttc
cagctggtggcggagcacatggagctggcaggcgaaggggatctgcaacaggcctttgac
gccctgaaactgaagctgcagcaggaggggcttttcgacagcagccataaactgcccctg
cccctgctgccgaaacggatcgggctgatcacctcccccagtggcgccgccatccgggac
gtgctgagcgtactgcagcgacgactgcctgccgtgccaattctgatctacccgacccag
gtccagggagaggaggccccacgctccctggtcaacgccctgcggttggccgaacaacgc
caggattgcgatctgctgatcctgacccggggtggcggctccctggaagacctgatggcg
ttcaacgatgaggcggtagcccgggtcatccacgatctcaccatcccgctgatctccgca
gtgggtcacgaggtggatttcaccattgccgatttcgtcgccgaccggcgcgccccgacc
ccgtcagtggcggcggagctggccactccggacagagaggaagtgctggaccggatcaac
tccctgcaacggcgtatccgcctggcaacgatccgccatcttaccgatagccgcaggagc
ctggagaacctcaccaagcggttggagcggggccatccgggtaaccggttgcagcagcag
ctacagtacctggatgacctgagcctacgcctggcgcgcggtatccggagtcaactggac
cggcgcctggcgaccatcgggttactggaaagtcggctgcagggagttatcccgactcac
cagatccggcgacaacgggaacagttcgacggactcagtcatcggcttatcctggccgcc
gccgccaacttgcgcatcaaacgtcaatccctcgaatcggccatcggaaaactggacacc
ctgagcccgctcgccacactccatcgcggctactccatcacccgggtactgccgagccat
gagctgttgcaacaggccagccaggtgcagcccggtgacgaactggagacccgggtcatg
gatggaaccctcatctcggtggttagccgtatcgacagcaattaa
DBGET
integrated database retrieval system