Sedimenticola thiotaurini: AAY24_09455
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Entry
AAY24_09455 CDS
T03943
Name
(GenBank) hypothetical protein
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds00300
Lysine biosynthesis
seds00550
Peptidoglycan biosynthesis
seds01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AAY24_09455
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AAY24_09455
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seds01011
]
AAY24_09455
Enzymes [BR:
seds01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AAY24_09455
Peptidoglycan biosynthesis and degradation proteins [BR:
seds01011
]
Precursor biosynthesis
Amino acid ligase
AAY24_09455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PucR
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AKH20542
UniProt:
A0A0F7JXW3
LinkDB
All DBs
Position
complement(2083567..2085087)
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AA seq
506 aa
AA seq
DB search
MVNLPRSLRLSQLLSGWVDLDQQADCDITDMTLDSRQIRPGSLFLACAGISHHGLEFVHQ
AVERGAAAVVCEPDERWTPDAIQALADSVSIPLCSVVDLSAKVSAIAGRFYADPSHHMAV
FGITGTNGKTSCSHFLAQVFRPEHLCGVIGTVGNGLPGELESASHTTPDAVTVQAQLRDL
RNRGADMVAMEVSSHALDQDRAAAVRFDVALLTNLTQDHLDYHTDMDGYAAAKLRLFTEC
HINCAVLNMDDPFAERVLVALPDRVERIGYSTNAEKVLATGRWIRATEIVPNADGMSLTI
DSSWGQGHLSSQLLGRFNASNLLAVLAVLLYRGTPLETALEKLARVETVTGRMQRLGGGD
QPLVVVDYAHTPDALEHALGALREHVGGRLVCVFGCGGDRDRGKRPLMGAIAERLADRVI
VTDDNPRTESGDRIVTEIVAGMTDAEGVQVVRDRAEAIAISIREAQPGDLILIAGKGHET
YQLVGDQVLHFSDCEQVEKVLQEVRR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttaacttgccccgcagtctccgactatctcagctgctttccggctgggtggatctg
gatcagcaggcggactgtgatatcaccgacatgaccctggacagtcgacagattcgtccg
gggtcgctgtttctggcctgcgcggggatctcccaccacgggcttgaatttgtccaccag
gcggtggagcgtggagccgccgccgtggtttgcgaaccggatgaacggtggactccggat
gccatccaggcactggcggatagcgtgtcgattccgctctgctcggtggtggacttgagt
gccaaagtcagcgcaatagcgggccgcttctatgccgatcccagccaccacatggccgta
ttcggtatcaccggtaccaatggcaagaccagttgcagccattttctcgcccaggtgttc
cgcccggagcatctctgcggcgtgattggtacggtgggcaacggcctgcccggggagctg
gagagcgccagccataccacgcccgatgcggtgacggtacaggcccagttgcgggatctg
cgtaaccggggcgcggacatggtcgccatggaggtctcctcccacgccctggatcaggat
cgcgcagcggcggtccgttttgatgtggcgctgttaaccaatctgacccaggatcatctc
gattatcacaccgacatggatgggtatgccgctgccaagctgcggctgttcactgagtgc
cacatcaactgtgccgtactcaatatggatgacccgtttgccgagcgggtacttgtcgca
ctgccggatcgggtggagcgaatcggctacagcaccaatgcagaaaaagtcctcgccacc
gggcgttggattcgggcaactgagatcgtcccgaatgctgatggcatgtccctgaccatc
gatagcagttggggacagggtcacttgtccagtcaattgctgggacgtttcaatgccagc
aacctgctggcagtgctggcagtgttgctctatcgcggcacaccgttggagacagcgctg
gagaaactggcccgggtggagacagtcaccgggcgtatgcagcgcctgggtggtggcgac
cagccactggtggtggtggattatgcccatacccccgacgccctggagcacgccctgggg
gcgctgcgtgaacatgtggggggacggctggtctgcgtgtttggttgtggtggcgaccgg
gatcggggcaagcggccgctgatgggtgccatcgccgagcgactggcggatcgggtgatt
gttaccgatgacaatccccgtaccgaatctggtgaccgtatcgttacagagatcgtcgcc
ggcatgaccgatgcggaaggcgtgcaggtggtgcgggatcgtgccgaggcgatcgccatc
agcatccgggaagcccagccgggggacctgattctgattgccggaaagggccatgagacc
taccaactggtgggcgatcaggtactccatttcagtgactgcgagcaggtggagaaggtg
ctccaggaggtgcggcgatga
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