Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_13495
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Entry
SEEH1578_13495 CDS
T02736
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEEH1578_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seeh03019
]
SEEH1578_13495
Enzymes [BR:
seeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SEEH1578_13495
Messenger RNA biogenesis [BR:
seeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SEEH1578_13495
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
UvrD-helicase
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGQ64290
LinkDB
All DBs
Position
2725537..2726898
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AA seq
453 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGRGRGQNQGGAGRSQQPRRQDSG
AAKAKPKPRTGEGKPAGDKARPPRRPRRITPAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggattaaaccctgatatcctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgattcccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattgttg
cagcatctgattacccatcagccgcatgctaaaggtcgtcgcccggtgcgcgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggcgaaaacgtcagagattacagtaaa
tatctcaatattcgctcgctggtggtatttggcggcgtaagcatcaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctcgacctggaa
catcaaaatgccgtgaagctggatcagattgagattctggtactggatgaagccgaccgt
atgctggatatgggcttcattcacgacattcgtcgcgtgctggcgaaactgccggcgaag
cgtcagaatctgctgttctccgccacgttctccgacgacatcaaagcgctcgccgaaaag
ctgttgcgcaatccgctggaaatcgaagtggcgcgccgcaacacggcctcagagcaggtg
acgcagcacgtgcactttgtcgataaaaaacgtaagcgcgaactgctgtcacaaatgatt
ggccagggcaactggcagcaggtgttggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggccgattttaaatccggcgatattcgcgtgctggtg
gcgacggatattgcggcgcgtggtctggatattgaagagctgccgcacgtggtcaactat
gagctgccgaacgtgccggaagattatgtacaccgtattggccgtaccggtcgcgcggcg
gcaactggcgaggcgctgtcgctggtctgtgttgacgagcataaactgttgcgtgatatc
gaaaaattgctgaaaaaagagatcccacgcattacgacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaacggtcgtcagcagcgcggcggcggcggtcgtgga
cgcggacaaaatcaggggggagcggggcgcagtcagcagccgcgacgtcaggatagcggg
gcggcgaaggcgaaaccaaaaccgcgcacaggcgaggggaaacccgctggcgacaaagca
cgtccgccgcgtcgcccgcgcagaatcacgcctgcccagtaa
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