Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_1141
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Entry
SPC_1141 CDS
T00862
Symbol
ratB
Name
(GenBank) putative outer membrane protein
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
InvE_AD
BIg21
Big_1
MG4
BatD
SpaA
Motif
Other DBs
NCBI-ProteinID:
ACN45307
UniProt:
C0PYP0
LinkDB
All DBs
Position
1193997..1200845
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AA seq
2282 aa
AA seq
DB search
MVWSQLDTSTAIPPLWLLTRTGVPYNTAVEVLDQKFAVDIAPAVGDPVTLAADHLDESLN
AAKVKADESIMLTVTTKDCGGEPEGNVDFVITRGDAQNRQGVVNNAAPVRVGNTELTTTA
TEYHGTTNAEGVATVVVTQANGPGVKTPLIAHPSSAPALKASVDVIFTTLTSPDSSSANM
YGHMAETSTATVDGASYTFYRPKLAAETHGEDRTASINNETWAQFNWGHADAHCDILPDA
RQLEGLKIARGDLATTLGWPVGLTSGDEEYWSSSQGSTATDHISIDMRSRALTQMPDATQ
SLVSCVDKAPPAVTPKLVISADNFDSTVNAAKVKVGEEINMKITVTDSATNKPLPYRYFN
VYLGDEQNRQNQKNADIDAAHQWTDDPVIITNLAGSDGHYHGVTDANGQFSLVLTQDKGA
GVLTPVRVVLFDGTEATQNVIFTVVTSPDVAQARMWGHMQGVVEAGNIYKRPLLAEEAAQ
DTGSEFENNEYWATFNSVTAATNQCGTGQVPGQLLLDTLYQAHSGNAMETTYGWPTQKHS
YIAADTDGSTTAHVNLATGADSMFSGAEPNYLSCSGNELVTSLDVYFNGDESLRNAVAKV
GEQITMNVHSVNALNGLSVPNASFTVTMSHGKNRDNATTGFTDPSDGTLVMGGTPFGSSR
ASMTYQGMTDAEGNATLVIEQPQGVGLLTPLSVLPVNSLITTPVNRSVKFTVPTSPDTPE
AQMWGHMADTLTVSDMEFQRPKLAAEATAATRTQEQDNETWARVSHADALNNPNAGGCEA
GHLPRADQLAALYASSDGNKIHTVSGWPTTYDYWSSTFASAATWQAVSLAAGGYTASGDA
SDYVSCLVSKNPTAASITIEPVDAALWYNANSEHAVKVKKGDTLQLKVTVKDASGNPLPQ
APFVLSRGDGYTRQGEKHIAGSGDGIVSAVVIDGDSLNDSATQIGGMTGENGSKIINVTR
PDAHGTKVAITAALYNNASATASIDTIFTVVTSPDSDKAKMWGHMPETTTAANGEVFKRP
LLSAEIASGVTHVDNTENNEAWGIVDFEMANDACGAGYVPTLADMQSLYDARPGGAMNTQ
QGWPLDGKNYQDSTADLSRSTQNRYVKSINLRDGGVGSLLWNEQLYFVCLQNAHPAATQI
TLTSPVYNDSDGFAKAKVGETIPVIITTRDAQGNPAADTPVIFTRGDSVGRANQEVNSSA
AADIQINHSDGRSSGANYYTATGSDGTLTLNISQDSGAGFKTPLTAAIEHNGVTSAPLPV
IFTVVTSPDTPKANYWGHMAETLTDSSGVAYRRPLLASEFSATPGKTLTIANGYYDKGET
WGMITVDKAWNGTGGGCGRDTLPTVANLQTLYGTYPDNAMRSRNGWPMTSSGNNNVSRYW
WAGDYVISSDGTKSLYAAVNLFNDGNDVKTTTSTSMYYMQTCLASPRSAAASLTLTLAGQ
DETTGSAKAKKGEQMAATIDVKDAAGQPMKNVMVKISRGSSYNRANSATSSSSVTDDITL
RNVMPSGLATYLLDTSAKYLYAQTDAQGQVTFTLAQDSTAGLKTTISAATMDGSNLTDSK
DAIFTVVTSPDSDKAKYWGHMPETFTNSKVVEFKRLLLRAELSSTADTSGYTENNETWYT
WSRYPNMYQDTASPCDRLGLPTVNDLQTLYTDYPNGALTTTLGLPVASGKYWGAGNSVPD
ATHSDSQFQYVRLSDNNTLTTKANTATAQLCLAKRRDLSIELTSSDMDADKGAPVAKKGE
SLPLTVTVRDGSGTPQPNTAIRLGRTLSIDRAGVVDGSSGGGMVLTSVAPSTGSMTFNCT
VSSCTSYWYGITDEDGKAQLEVTQDDSRGLRTPLQAMLVDDPLTVSDMDVIFTVITSPDS
DKAKYWGHMPETVTNSAGVKFRRPLLAAEMTSNSGTYLVNNETWPLVTAANTEKAGATGC
DAEYQPLSGDLQTLYSDNPNGAIGTNYGWPVAGNKSWWAADRAPNTGYYQFINLNSGGKG
TASSSTATGAQVCLVEPRTSTPASITLTSTAMDSAKNAAVVAKGSAMPLTVTVKDSSGNP
VANVGFTLSRGDSKNRAGMVITDGDVAADAGADDLMLKELTPASASQSMTTTGIVFTGTT
GSDGTATFTLNQDKSLGLKTPLTVKVTDNTTLHASLDVIFMVLTSPDTDKALFWGNMSDT
TSVNGKTLHRPWLQAEMLSGVTPVFTNGVHANNEYWAMAHTVDNTKWDIAKQCGSLSKAP
DNNDLLTLYHSISSLGWPTLGYPYLSKSTSSGGMYCGVDENTKSQNCAIKPAGTAGYATC
VE
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
gtggtctggtcgcagctggatacctcaaccgccataccgccgctgtggttgcttacccgc
accggcgtgccttataacacggcggtcgaagtgcttgatcaaaagtttgccgtggatatc
gcgcccgccgtgggcgacccggtaacgctcgccgccgatcatctggatgagtcgctcaac
gccgcgaaggtcaaagcggacgaaagcatcatgctgacggtaacgaccaaagactgcggc
ggcgaaccggagggcaacgttgatttcgtgattacccgcggcgacgcgcaaaaccgccag
ggcgtggtaaacaatgccgcgccggtgcgcgtcggcaacaccgaactgaccaccaccgcc
acggaatatcacggtacgaccaacgccgagggcgtggcgaccgtggtcgtcacccaggcg
aacggcccgggcgttaaaacgccgctgatagcgcacccgtcgagcgcgccagcgctgaaa
gccagcgtggacgtgatttttaccaccctcaccagcccggacagcagcagcgccaacatg
tacggtcatatggcagagacgtccaccgccacggtggacggcgcaagctacaccttttac
cgccccaaactggcggcggaaacccacggtgaagaccgcaccgccagcatcaacaatgaa
acctgggcgcagttcaactggggtcacgccgacgcgcactgcgatattctgccggatgca
cgccaactggaagggttaaaaattgcgcgcggcgatctggccaccaccctcggctggccg
gtagggctgacatccggtgatgaagagtactggtcctcctcccagggatcaactgccact
gaccatatcagcattgatatgcgcagccgcgcccttacgcagatgccggacgccacgcaa
tcgctggttagctgcgtggataaagccccgcctgcggtcacgccgaaattagtgattagc
gccgataattttgattcaacggtcaacgcggcgaaagtgaaggtgggcgaagagatcaac
atgaagatcaccgtcaccgacagcgccaccaataaaccgctgccttatcgctactttaac
gtctacctgggcgacgagcaaaatcgccagaatcaaaagaacgccgatattgacgccgcc
catcagtggacggatgatccggtaattatcaccaatctggcaggcagcgacggccactat
catggcgtcaccgacgccaacggtcagttctcgctggtgttgactcaggataagggtgcg
ggcgtattaaccccggtgcgcgtggtgctgttcgacggcacggaagcgacgcagaacgtg
atttttaccgtcgtcaccagcccggacgtggcgcaggcgcgcatgtggggccatatgcag
ggcgtggtggaagcgggcaatatctacaaacgcccgctgctggcagaagaggccgcgcag
gataccggttccgaatttgagaataacgaatactgggcgacgtttaactcggtaacggcg
gcgacgaaccagtgcggtaccggccaggtgccggggcaactgctattggatacgctgtat
caggcccattccggtaacgcgatggaaacgacctacggctggccgacgcagaaacacagc
tatatcgcggcggatactgatggttccaccaccgcgcacgtcaacctggcgaccggcgcg
gacagcatgttcagcggcgccgaaccgaactatctctcctgctccggcaatgagttggtg
accagtctggacgtttactttaatggcgatgagtcgttacgtaatgcggtagccaaagtc
ggcgaacaaatcacgatgaacgtccattccgttaatgcgctgaacgggttaagtgtgccc
aacgccagctttaccgtcaccatgtcgcacggcaaaaatcgcgacaacgccaccacgggc
tttaccgatcccagcgacggaacgctggtgatgggcggaacgcctttcggctcttcccgg
gcgtcgatgacgtaccagggcatgaccgatgccgagggcaacgccacgctggtgattgaa
cagccgcagggcgtgggcttgctgacgccgttgagcgtactgccggtcaactcactgatt
accacgcccgtcaaccgcagcgtgaaatttaccgttcccaccagccccgatacgccggag
gcgcagatgtggggccatatggcggacacgctcaccgtaagtgatatggaattccagcgg
ccaaagctggcggcggaagcgactgccgccacccgtacccaggaacaggataacgaaacc
tgggcgcgcgtcagccacgccgacgcgctgaataaccccaacgctgggggctgcgaggcc
ggccatctgccgcgcgccgatcagcttgccgcactgtatgcctccagcgacggcaataaa
atccacaccgtatccggctggccgacgacgtatgactactggtcttccaccttcgccagc
gccgctacatggcaggcggtatcactggctgcgggcggctataccgcttccggcgatgcg
tcggactacgtgagctgtctggtcagcaaaaatccgacggcggcgtctatcactattgag
ccggtggatgcggcattgtggtataacgcaaacagcgaacacgcggtgaaggtgaaaaag
ggcgatacgctccagcttaaagtgacggtaaaagacgccagcggcaatccgctgccgcaa
gcgccgttcgtgttaagccgcggcgacggctatacccgccagggggagaaacatatcgct
ggtagtggcgacggcatcgtctcggcggtggtgattgacggcgattcgctcaacgacagc
gccacccaaatcggcggtatgaccggtgaaaacggcagcaaaatcatcaacgtcacccgc
ccggatgcccacgggacgaaagtcgcgattacggcggcgctgtacaataacgccagcgcg
acggccagcatcgatactatttttaccgtggtcaccagcccggacagcgacaaagccaaa
atgtggggccatatgccggaaacgacgacggcggccaacggcgaggtgtttaagcgcccg
ctgttatcggctgaaatcgccagcggcgttacccacgtcgacaatacggaaaacaacgaa
gcgtggggaatcgtcgattttgaaatggcgaacgacgcctgcggcgcgggatacgtgccg
acccttgccgatatgcaatcgctgtacgacgccaggcccggcggcgccatgaatacccag
cagggctggccgctggacggtaaaaactaccaggacagcaccgccgatttgagccggagt
acgcaaaaccgctacgttaagtcgattaatctgcgcgacggcggcgtcggttcgctattg
tggaatgaacaactctattttgtctgcctgcaaaacgcccatccggcggcgacgcagata
acgctcacttcgcctgtgtataacgacagcgacggattcgccaaagcgaaagtcggcgag
accatcccggtcatcatcaccacgcgggatgcccagggcaacccggccgccgacacgccg
gttatctttacgcgcggcgacagcgtcgggcgcgcgaatcaggaggtgaatagctcggcg
gcggcggatatacagataaaccacagcgacgggcgtagcagcggcgctaactattacacc
gccacgggctccgacggcacgctgacgctgaatatcagccaggacagcggcgcgggcttt
aaaacgccgctgacggcggcgatagaacacaacggcgtaacgagcgcgccgctgccagtc
atctttaccgtggtcaccagtccggacacgccgaaggccaactactggggccatatggcg
gaaacgctgaccgacagcagcggcgtggcgtacaggcgtccgctgctggccagcgagttt
agcgctacgcccggcaaaacgctgaccatcgccaacggctactacgacaaaggcgaaacc
tggggcatgataaccgtcgataaagcctggaacggcaccggtggcggctgtgggcgcgac
acgctaccgaccgtagccaacctccagacgctgtacgggacatacccggataacgccatg
cgcagccgtaacggctggccgatgaccagttcaggcaacaacaacgtcagccgctactgg
tgggcgggggattacgtgatatcgtcagacggcacgaagtcgctctacgcggcggtcaac
ctgtttaacgacggcaatgatgtcaaaacgacgaccagcacctcgatgtactacatgcag
acctgtcttgcctcgccgcgcagcgccgccgccagcctgacgcttacgctggcaggccag
gatgaaaccaccggaagcgcaaaggcgaagaagggcgagcagatggccgccaccatcgac
gtgaaagacgccgcaggtcagccgatgaaaaacgtgatggtgaaaatcagccgcggatct
tcgtacaatcgcgccaacagcgccacatcgtcctcaagcgtcacagacgatattacgctg
cgtaatgtgatgccgtccggcctggcgacatacctgctggatacctcggcgaaatatctg
tatgcgcaaactgatgcccagggacaggtgacatttacccttgcgcaggacagtaccgcc
ggtttaaaaaccactatcagcgccgccacgatggacggcagcaacctgacagacagcaaa
gacgcaatctttaccgtagtgaccagcccggacagcgataaggccaaatactggggccat
atgccggaaacctttaccaacagtaaggtggttgaatttaagcgactgctgctgcgcgct
gaactttcttcaacggcggacacgtcgggttatacggaaaataacgagacctggtatacc
tggagccgttatccgaatatgtatcaggacaccgccagcccgtgcgatcggctggggttg
ccgacggtaaatgatttacagacgctatataccgattatcccaatggcgcactcacgaca
acgcttggcctaccggtggcatcaggaaaatattggggggcgggtaactcagtaccggat
gccacgcactcagacagtcagtttcagtatgtcagactcagcgataataatacgctgaca
accaaagccaataccgccacggcgcagctttgtctggcaaagcgccgggacttgtcgata
gaactcacctccagcgacatggatgcggataaaggcgctccagtggcgaagaagggcgag
agcctgccgttgaccgtcactgtgagggatggttccggcacgccgcagcccaataccgct
atccgtttgggacgaacgctttcgatagaccgggcgggtgtcgttgatggcagttccggc
ggaggcatggtactcacatcggttgcgccgtctacgggctcaatgacgtttaactgcacg
gtatcttcgtgcacaagttattggtatggcattacggatgaggatggtaaagcgcaactc
gaagtgacgcaggatgattcccgtggcctgagaacaccgctacaggcgatgcttgtcgac
gatccgctgacagttagcgatatggacgtcattttcaccgtcattaccagcccggacagc
gataaagccaaatactggggacacatgccggaaaccgtgaccaacagcgcgggcgtgaag
ttccggcgtccgctgctggcggcggagatgacgtcgaatagcggtacttacctggttaac
aatgaaacatggcccttagtcaccgcagcgaacactgaaaaagcgggcgcaaccggctgt
gatgcggaataccagccgttgtcgggcgatctgcaaacgttgtatagcgacaatcctaac
ggcgcaatcggtacaaattacggctggccggtggcggggaacaaatcctggtgggcggcg
gatcgtgcgccgaataccggatattaccaatttataaacctgaatagcggcggtaagggc
accgccagttcatcgactgccaccggcgctcaggtgtgtctggtcgagccgcgtacttct
actcctgccagtattacgctgacctcgacggcgatggacagcgcgaaaaatgcggcggta
gtggcgaagggaagtgcgatgccgttaacggtgacggtaaaagatagcagcggtaacccg
gtcgccaacgtcggttttacgttgtcacgtggcgattcgaaaaatcgggcaggtatggtg
ataacggatggcgacgtggcagcggatgccggagcagacgatctcatgcttaaagagctg
actcccgcaagcgccagccaaagtatgaccaccaccgggattgtctttaccggcactacc
ggcagcgacggtacggcaacgtttacgctcaatcaggataaaagcctggggttgaaaacg
ccactcacggtgaaagtgacggacaatacgactcttcacgcatcgctggatgtgattttt
atggtacttaccagcccggatacggataaagcgttgttctggggaaatatgtcggatacg
acatccgtcaacggaaaaacgctgcatcgtccgtggcttcaggctgagatgctgtcaggc
gtgacgccagtatttaccaacggagtgcatgcaaataacgagtactgggcgatggcgcat
acggtggacaacacgaaatgggatattgccaaacagtgcggtagccttagcaaagcaccg
gataataacgacctgttgacgctgtatcattcaattagctcgttaggctggccgacgctg
ggctatccctatttatctaaatcaacctcgagcggcggcatgtattgcggcgtagatgag
aataccaagagtcaaaactgcgccattaagccggcaggcacagcgggttatgcgacgtgc
gtggagtaa
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integrated database retrieval system
