Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C26180
Help
Entry
STMDT12_C26180 CDS
T01742
Name
(GenBank) Gifsy-1 prophage VmtH
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_2
Tape_meas_lam_C
DUF3437
Motif
Other DBs
NCBI-ProteinID:
BAJ37561
NITE:
STMDT12_C26180
LinkDB
All DBs
Position
complement(2738594..2741689)
Genome browser
AA seq
1031 aa
AA seq
DB search
MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSAS
LEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRT
SAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAE
ALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLG
LKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAA
VYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQV
VGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTAT
QLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDR
MLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKA
QAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERH
KKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQ
RIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLAD
EESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQ
AEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAF
NGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTP
SGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLR
RGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQ
SRDGGIAGGGR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggaccagatagcgaacctggtcattgatttaagtatcgacagcgcagagttccgaaac
gaagttccgcgcattaaaaaattgctgaacgatgcggctggtgactcagaacgttcagcg
gcccggatgcagcgttttctggataagcagacggaggcgacgcgccggacgtccgccagt
ctggagcaagtgactgccagcagtaccgcgtacagttccgctgtggagaaaagcgcagcg
gccagtacgcgtctggcggcggatgtggatcagacgcgacagcgggtggaggcactggga
aggaaactgcgtgaggaacaggcgcagtcagcggctgtggcggcagcacaggacaggaca
agtgctgctttttaccgccagattgacagtgtaaaacagttaagcggtggtctgcaggag
ctgcagcgtatccaggcgcaggtacgacaggcgaaaggacgcggagatatctcacagggc
gattatctggcgctggtgtctgaaaccgccaggaagacccgtgagcttaccgatgccgaa
gcgctggccacgcagaaaaaagcacagtttatacgccgcctgaaagagcagacgacggta
cagggcctctcccgtaccgagctgctgcgggtgaaggcggctgaactgggtgtcagtagc
gccgcagatatttatatccgtaaactggagcgtaccggaactgccacccatacgctagga
ctgaaaagcgctgctgcccgtcgtgaactgggcgtgctggctggtgagctggcccgtggg
aatttcggggcactgcggggaagtggtatcacgctcgctaaccgcgccgggtggatcgag
caactgatgtctccgaagggcatgatgctcggcgggctggctggcggcgtggctgctgct
gtttacgggctgggcaaggcctactatgaaggcgctaaggaaagcgagacgttcaataaa
cagcttattctgaccgggagttatgccggaaaaaccacaggccagcttaatgcgatggcg
aagtcgctcgccggaaatggcgtcacgcagcacgatgctgcaggcgtgctggcacaggtg
gtcggtagcggagcgtttaccgggcaggcaatggcaatggtatcccgtaccgcgaccaga
atgcaggaaaacgtgggacaatcagtggatgaaaccatccgccagtttaaacgcctgcgg
gatgatccggtgaatgcggcgaaagaactggacaggacactgcattttctgacagccacc
cagcttgaacaaatcagggtactgggcgagcagggaagagtggctgatgccgcgaaaatt
gccatgtccgcgtattcggaagaaatgaataagcggatgggggacgtacacgacaatctg
ggctggattgaaagagcatggaatgctgtcggtgatgcggcgaagtgggcatgggatcgg
atgctggatatcgggcgggaagacacgctcgatgaaaagatcgcgacactgcaggaaaaa
atcgcgcgcgacagaaaaacgccctggacggtgtcttcttcccagactgaatacgatcag
cagcagctgaacgaacttcaggaacagaaacgccagaaggacctgctggatgcgaaggcg
caggcagagcgtaattatcaggaaacgcagaaacgtcggaacgagcagaacgccgcgctg
aaccgggataatgaaactgaatccctgcggcaccaacgggaggtggcgcgcattaccgcc
atgcagtatgccgatgctgctgtacgcaatgccgcactggagcgcgaaaatgaacgtcat
aaaaaggcgttgtcacaacaggcgaaaaagccaaagacttaccacaacgacgaggccagg
cgactgcttttgcagtacagccagcaacaggcgcagactgaagggcagattaccgccgcg
aagctttccacgaccgaaaaaatgacggaagcgcataagcagcttttgtcatttcagcag
cgcatcgctgatttgtccggtaaaaaactgacggcggatgaacaaagcgtactggcacat
aaggatgaaattgcgcttgcgctacagaagctggatatctcacaacaggatttgcaacac
cagaatgcccttaatgaactgaagaaaaagacgctcacattgaccagccagctcgctgac
gaagaatcccgcgtcaggcaacagcacgcaatggcgctggccacaatgggtatgggcgat
cagcaacgtggccgatacgaagagcgtctgaaaattcagcagcactaccaggaacaactg
gagcagcttaaacgcgacagcaaggcaaaagggacatacggttctgacgaatatcgtcag
gcggagcaggcgctgaagggcagtctcgatcgccggctggctgagtgggcggattacaat
gcgaaagttgacgctgcgcagggagactggacgctgggggcgtcgcgggcgctggataac
tttctggcgcagggcggcaatgtggcaggcatgacggagaacgttttcacaaacgcattt
aacggcatggcggacagtatcgcgaattttgccgtgaccggaaagggcagtttccggagc
ctgacggtctccatcctggctgaccttgcaaaaatggaggcacgtattgcggcttctaaa
ctgttgggttcagtgctggcaatgttcggctttggcacatcggcaggcggcagtacacca
tcaggggcatacagttctgcggcgctgtcggttattccgaatgcggacggcggcgtgtac
cgttcggcaggactcagccagtacagcggcagcattgttaatcgcccgacattttttgct
tttgccaaaggtgccggggtgatgggcgaggcaggaccggaggcaatattaccacttcgt
cgtggtgctgacggtaagctgggtgtcgtggcagccggttcaggagggatggcgatgttt
gcgcctgagtacaacattgaaatccacaacgacgccggcaacggacagattggtccgcag
gcattacaggccgtatataacattggaaaaaaagccgccattgatttctggcaacagcag
tcgcgtgacgggggtattgctggaggagggcgataa
DBGET
integrated database retrieval system
