Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C30610
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Entry
STMDT12_C30610 CDS
T01742
Name
(GenBank) DNA-binding transcriptional regulator GalR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sem03000
]
STMDT12_C30610
Transcription factors [BR:
sem03000
]
Prokaryotic type
Helix-turn-helix
LacI family
STMDT12_C30610
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_26
MerR
HTH_7
PucR
HTH_23
DUF3853
HTH_31
PIN_9
HTH_38
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAJ38004
NITE:
STMDT12_C30610
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Position
3193869..3194897
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AA seq
342 aa
AA seq
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MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNANARALAQQATE
TLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV
VHAKMIPDADLASLMKQIPGMVLINRILPGLEHRCVALDDRYGAWLATRHLIQQGHTRIG
YICSNHTISDAEDRLRGYYDALAESHIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTA
VACYNDSMAAGAMGVLNDNGVGVPGEVSLIGFDDVLVSRYVRPRLTTIRYPIVTMATQAA
ELALALAGKCPTPEVTHVFSPTLVRRHSVSTPTDTGHLSTTD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccataaaagatgtagcccgactggccggtgtttcagtcgccaccgtttctcgc
gttattaacgattcgccaaaagccagcgaagcgtcccggctggcggtaaccagcgcaatg
gagtccctgagctatcaccctaacgccaacgcgcgcgcgctggcacagcaggcaacggaa
accctcggtctggtggtcggcgacgtttccgatccttttttcggcgcgatggtgaaagcc
gttgaacaggtggcgtatcacaccggcaattttttactgattggcaacgggtatcataac
gaacaaaaagagcgtcaggctattgaacagttgattcgtcatcgttgcgcagcgttagtg
gtgcacgccaaaatgattccggatgcggacctggcctcattaatgaagcaaatccccggc
atggtgctgattaaccgcattttaccggggttagaacaccgctgtgtcgcgctggatgac
cgttacggggcatggctggcgacccggcatctgatccagcaaggtcatacgcgtattggg
tatatctgttccaatcacactatctctgatgccgaagatcgcctgaggggctattacgat
gcgctggcggaaagccatatcccggctaacgatcggctggtgacgttcggcgaaccggat
gaaagcggcggcgagcaggcgatgactgagttattaggtcgcggcagaaattttaccgcg
gtggcctgctataacgactcgatggcggctggcgcgatgggtgtattaaatgataatggc
gtgggggtgccgggcgaagtatcgctcatcggttttgatgatgtactggtctcacgctat
gtgcgtccccgactgaccaccattcggtatccgatcgtcaccatggcgacacaggcggcg
gagctggccttagcgctggcagggaaatgtcctacgccagaagtaactcatgtatttagt
ccgacactggtacgccgacattcggtgtccacgccgacggataccgggcacctgtcgaca
accgattaa
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