KEGG   Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_42481
Entry
DT104_42481       CDS       T02874                                 
Symbol
uvrA
Name
(GenBank) excision nuclease subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
send  Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:send00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DT104_42481 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:send03400]
    DT104_42481 (uvrA)
DNA repair and recombination proteins [BR:send03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DT104_42481 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DT104_42481 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: CCW76946
LinkDB
Position
complement(4550120..4552945)
AA seq 941 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH
VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPMLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatattaacctcgtc
atcccccgcgacaaactgattgtcgtgaccgggctttcgggttcaggcaaatcctcactg
gctttcgacactctgtatgccgaagggcagcgtcgttacgttgaatcgctctccgcttac
gcgcggcagtttttgtcgctcatggaaaaaccggatgtcgaccatattgaggggctatcg
cccgcgatctcaattgaacagaaatcgacatcgcacaacccgcgctctacggtgggtact
attaccgagatccacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgttgt
ccggatcatgacgtgccgctggcggcgcaaaccgttagccagatggtcgataacgtgctg
tcacagccggaaggcaaacgtctgatgctgctcgcgccgattattaaagagcgtaaaggc
gaacacaccaaaacgctggaaaatctggcaagccagggttacattcgcgcccgtattgac
ggcgaagtctgcgatctctccgatccgccgaagctggagctacaaaagaaacataccatt
gaggtggtgatcgatcgcttcaaagttcgcaacgatctttcccaacgcctggcggagtcg
ttcgaaacggcgctggaattatccggcggcacggcggttgttgccgatatggacgatgag
aaagcggaggagcttctgttctccgccaattttgcctgtccgatttgcggctacagtatg
cgcgagctggaaccgcgtctgttctcgttcaacaacccggcaggcgcctgcccgacctgt
gacggcctcggcgttcagcaatatttcgatccggaccgcgtgatccagaatcccgacctg
tcgctggcaggcggcgcgattcgtggttgggatcgtcgcaatttttactactttcaaatg
ctcaagtcgctggcggaacactataagttcgacgtagatgcgccgtgggcaagcctcagc
gccaacgtacataaagtcgtgctgtacggttccggcaaagagaacattgaatttaaatat
atgaacgatcgcggcgatacctccgtgcgccgccatccgttcgaaggcgtgctgcataat
atggagcgccgttataaagagacggaatccagcgcggtgcgcgaagagctggcgaagttc
atcagtaatcgcccctgcgccagctgtgaaggcacgcgactgaatcgcgaagcgcgccat
gtatttgtggaaaatacgccgctgcctgctatttctgatatgagcattggccatgcgatg
gattttttcactaatctcaagctttccgggcaacgagcgaaaatcgccgaaaaagtgcta
aaagagatcggcgatcgcctcaagtttctggtgaacgtcggcctgaactatctcacgctc
tcccgctcggcagagacgctttccggcggcgaagcccagcgtattcgtctggcgagccag
ataggcgccgggttagtcggcgtgatgtatgtgctggatgagccgtccatcggtctgcac
cagcgcgataacgaacggctgctgggtacgctgattcatctgcgcaatcttggcaatacc
gtgattgtggtggaacacgatgaagacgccattcgcgccgccgaccatgtgattgatatt
ggccccggcgcgggcgttcacggcggcgaggtggtggcggaaggcccgctggaagccatt
atggcggtaccggaatcgctgaccggccagtacatgagcggtaaacgcaaaattgaagtg
ccgaaacaacgcgtgccggcaaatccagaaaaagtgctcaaactcaccggcgcgcgcggc
aacaacctgaaagatgtgacccttacgctaccggtagggctgtttacctgtatcaccggc
gtctcgggttccggtaaatcgacgctgattaacgacacgctgttccccatcgcccagcgt
cagttaaacggggcgactatcgccgaaccggcgccgtatcgggatattcaggggctggaa
catttcgataaagtgatcgatatcgaccagagcccaatcgggcgcaccccgcgttccaac
ccggcgacctatacgggcgtctttaccccggttcgcgagctttttgctggcgtgccggag
tctcgctcgcgcggctacacgccagggcgattcagcttcaacgtgcgcggcggtcgctgc
gaagcgtgccagggcgatggcgtcattaaagtcgaaatgcactttctgccggatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgggaaacgctggagattaagtac
aaaggcaagaccatccacgaagtgctggatatgaccattgaagaagcgcgtgagttcttt
gatgcggttccggcgctggcgcgtaagctgcagacgctgatggacgtagggctgacctat
atccgtcttggtcagtcggcgacaacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgaactgtcgaagcgcggcaccgggcagacgctgtatattctcgacgagccaact
accggcctgcactttgccgatattcagcagttgcttgacgttctgcatcagttgcgcgat
cagggcaacaccatcgtggtgatcgaacacaacctggacgtcattaaaacggcggactgg
attgtcgacctcggcccggaaggcggcagcggcggcggcgaaattctcgtcgccggtacg
ccggaaaccgtggcggagtgcgaggcgtcgcataccgcccgcttccttaaacctatgctc
aaataa

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