Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_07111
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Entry
STMDT2_07111 CDS
T02869
Symbol
nei
Name
(GenBank) endonuclease VIII, DNA N-glycosylase with an AP lyase activity
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STMDT2_07111 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senr03400
]
STMDT2_07111 (nei)
Enzymes [BR:
senr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STMDT2_07111 (nei)
DNA repair and recombination proteins [BR:
senr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STMDT2_07111 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TniQ
DUF4351
Motif
Other DBs
NCBI-ProteinID:
CDG06869
LinkDB
All DBs
Position
793908..794699
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AA seq
263 aa
AA seq
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MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQLVTRIETRGKALLTHFS
NGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKTILLYSASDIEMLTAEQLTTH
PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGNYLRVEILWQVG
LTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADENKHHGALFRFKLFHRDGEACER
CGGIIEKTTLSSRPFYWCPHCQK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccggaaattcgtcgtgcggcggataatctggaggcggcaatcaaaggc
aaacccttaaccgatgtctggtttgcctttgcacagttaaaaccgtatgaatcgcagctt
accggtcaacttgttacccggatagagacgcggggaaaagcgttattgacccacttttca
aatggcctgacgctctacagccacaaccaactctatggcgtatggcgggtgatcgatact
ggtgaaataccgcagaccacgcgtatattgcgcgtcaggctacaaacggcggataaaact
attctgctttatagcgcgtctgatatcgaaatgctgacagcagagcagctcacgacgcac
ccctttttacagcgagtcggtccggatgtgctggacgcgcgtctcactccggaagaggtt
aaagctcgattgctgtcgccgcgttttcgcaaccgacaattttccgggctgttgctggat
cagtcctttctggcgggactggggaattatctgcgcgttgaaatcctctggcaggtagga
ttaaccggacagcataaagcgaaagatctcaacgaggcgcaactgaatgcgctttctcac
gcgctgttggatattccgcgcctttcctacactactcgcggtcaggcggatgagaacaag
catcatggcgcactgtttcgctttaagcttttccaccgtgacggcgaagcgtgtgagcgg
tgcggcggcattattgaaaagacaacactgtcctcacgcccgttttactggtgcccgcat
tgccagaaatag
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integrated database retrieval system
