Salmonella enterica subsp. enterica serovar Agona 24249: Q786_18285
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Entry
Q786_18285 CDS
T02944
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sens
Salmonella enterica subsp. enterica serovar Agona 24249
Pathway
sens03030
DNA replication
sens03410
Base excision repair
sens03420
Nucleotide excision repair
sens03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sens00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q786_18285
03410 Base excision repair
Q786_18285
03420 Nucleotide excision repair
Q786_18285
03430 Mismatch repair
Q786_18285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sens03032
]
Q786_18285
03400 DNA repair and recombination proteins [BR:
sens03400
]
Q786_18285
Enzymes [BR:
sens01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Q786_18285
DNA replication proteins [BR:
sens03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q786_18285
DNA repair and recombination proteins [BR:
sens03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Q786_18285
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q786_18285
MMR (mismatch excision repair)
DNA ligase
Q786_18285
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q786_18285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AHB46263
LinkDB
All DBs
Position
complement(3816013..3817698)
Genome browser
AA seq
561 aa
AA seq
DB search
MRLWKSMAWGILLWHSQSGALCPAWPPARAAEEIARLQQQLADWNDIYWKQGVSAVDDSV
YDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTGVRKLADRQAVEQWMRGRSEL
WVQPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQG
EIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQL
AKAGFSLTKKYSLVVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPASQYWRPGQGDW
LAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKRWEAWDI
APGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNSLTCFYASATCQEQFISRLVW
LGSRSALGLDGMGEASWRALHQTHRFEHIFSWLTLTSAQIANTPGFAKGKSEQIWRQFNL
ARRQSFTRWIMAMDIPLTQAALQASGDRSWEQLLMRTEQHWRQLPATGERRAGRVIDWRN
NPQIKTLSRWLAAQHIPGFGS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagattatggaaaagtatggcgtggggaattttattgtggcattcgcagagtggggcg
ctttgcccggcctggccgccagcaagggccgctgaagaaatcgcccgtttacagcaacag
ctcgctgactggaatgacatctactggaaacaaggggttagcgcggttgacgatagtgtg
tacgaccaactcagcgcaagactggttcagtggcaacgctgtgttggtcaggatgtttca
tctactccggtttcaccgccgttaaacggtacaacaatgcatcctgttgcgcatacgggc
gtacgcaaactcgcggaccgacaggcggtagaacagtggatgcgcgggcgcagcgagctt
tgggtacagccaaaagtggatggcgtagcggtaacgctggtttatcaaaacggtaaactg
accagggctattagccggggtaacggactacaaggcgaggactggacgccaaaaattcgc
ctgatcccctctataccgcagacaacacaaggcgcgctagctaacgcggtgttgcagggc
gaaatctttctacagcgcgaggggcatatccagcaacggatgggcgggatgaatgcgcgc
tcgaaagtcgcaggaatgttaatgcgccaggataacgcctccgcgctaaattcgttgggt
atttttatttgggcgtggccggacggtccggcaaatatgcccgaaagattaagccaactt
gctaaggctggattcagtctgacgaagaaatattccctggtggtaaaagatgccagcgag
gtcgagcgggcgcgccagtcatggctgacgtcagcgttgccctttgtgacggatggcgta
gtgatacgcatggctaaagagcccgcgtcacaatactggcgacccgggcagggcgactgg
ctggcagcatggaaatatccgccagtagcgcaggtcgcgcaagtgagcgctattcagttc
tcggtggggaaaagcggcaaaattaccgtagtagcgtcgcttgtccccgttatattggat
gataagcgggttcagcgggtcaatatcggctctgtgaaacgttgggaagcgtgggatatc
gcgccgggcgatcagatcctggtgagtctggccgggcaaggcattccccggcttgatgag
gtcgtctggcggagtcgtgagcggagtaaacctgtaccgcctgatagccatttcaactcg
ctgacctgcttttacgcgtcggcaacgtgtcaggaacagtttatctccaggctggtatgg
ctggggtcacggtcggcgttgggtctggacggaatgggcgaagccagctggcgggccttg
catcagacgcatcgctttgagcatatcttctcctggcttaccctgacgtcagcgcaaata
gccaacacgccaggctttgctaaaggaaaaagcgagcagatatggcggcaatttaacctg
gcgcgccggcagtcgtttacccgctggatcatggcgatggatatccccttaacgcaggct
gcattacaggccagcggcgatcgttcatgggagcagttattaatgcgaacagagcaacac
tggcggcagttaccagcgacgggcgagcgtcgtgccgggagagtcatcgactggcggaat
aatccgcagatcaaaacgctgagcagatggctggctgctcagcatattcccggatttggg
tcttag
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