KEGG   Salmonella enterica subsp. enterica serovar Agona 24249: Q786_18285
Entry
Q786_18285        CDS       T02944                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sens  Salmonella enterica subsp. enterica serovar Agona 24249
Pathway
sens03030  DNA replication
sens03410  Base excision repair
sens03420  Nucleotide excision repair
sens03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sens00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q786_18285
   03410 Base excision repair
    Q786_18285
   03420 Nucleotide excision repair
    Q786_18285
   03430 Mismatch repair
    Q786_18285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sens03032]
    Q786_18285
   03400 DNA repair and recombination proteins [BR:sens03400]
    Q786_18285
Enzymes [BR:sens01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Q786_18285
DNA replication proteins [BR:sens03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Q786_18285
DNA repair and recombination proteins [BR:sens03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Q786_18285
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Q786_18285
   MMR (mismatch excision repair)
    DNA ligase
     Q786_18285
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Q786_18285
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB RNA_ligase
Other DBs
NCBI-ProteinID: AHB46263
LinkDB
Position
complement(3816013..3817698)
AA seq 561 aa
MRLWKSMAWGILLWHSQSGALCPAWPPARAAEEIARLQQQLADWNDIYWKQGVSAVDDSV
YDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTGVRKLADRQAVEQWMRGRSEL
WVQPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQG
EIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQL
AKAGFSLTKKYSLVVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPASQYWRPGQGDW
LAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKRWEAWDI
APGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNSLTCFYASATCQEQFISRLVW
LGSRSALGLDGMGEASWRALHQTHRFEHIFSWLTLTSAQIANTPGFAKGKSEQIWRQFNL
ARRQSFTRWIMAMDIPLTQAALQASGDRSWEQLLMRTEQHWRQLPATGERRAGRVIDWRN
NPQIKTLSRWLAAQHIPGFGS
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagattatggaaaagtatggcgtggggaattttattgtggcattcgcagagtggggcg
ctttgcccggcctggccgccagcaagggccgctgaagaaatcgcccgtttacagcaacag
ctcgctgactggaatgacatctactggaaacaaggggttagcgcggttgacgatagtgtg
tacgaccaactcagcgcaagactggttcagtggcaacgctgtgttggtcaggatgtttca
tctactccggtttcaccgccgttaaacggtacaacaatgcatcctgttgcgcatacgggc
gtacgcaaactcgcggaccgacaggcggtagaacagtggatgcgcgggcgcagcgagctt
tgggtacagccaaaagtggatggcgtagcggtaacgctggtttatcaaaacggtaaactg
accagggctattagccggggtaacggactacaaggcgaggactggacgccaaaaattcgc
ctgatcccctctataccgcagacaacacaaggcgcgctagctaacgcggtgttgcagggc
gaaatctttctacagcgcgaggggcatatccagcaacggatgggcgggatgaatgcgcgc
tcgaaagtcgcaggaatgttaatgcgccaggataacgcctccgcgctaaattcgttgggt
atttttatttgggcgtggccggacggtccggcaaatatgcccgaaagattaagccaactt
gctaaggctggattcagtctgacgaagaaatattccctggtggtaaaagatgccagcgag
gtcgagcgggcgcgccagtcatggctgacgtcagcgttgccctttgtgacggatggcgta
gtgatacgcatggctaaagagcccgcgtcacaatactggcgacccgggcagggcgactgg
ctggcagcatggaaatatccgccagtagcgcaggtcgcgcaagtgagcgctattcagttc
tcggtggggaaaagcggcaaaattaccgtagtagcgtcgcttgtccccgttatattggat
gataagcgggttcagcgggtcaatatcggctctgtgaaacgttgggaagcgtgggatatc
gcgccgggcgatcagatcctggtgagtctggccgggcaaggcattccccggcttgatgag
gtcgtctggcggagtcgtgagcggagtaaacctgtaccgcctgatagccatttcaactcg
ctgacctgcttttacgcgtcggcaacgtgtcaggaacagtttatctccaggctggtatgg
ctggggtcacggtcggcgttgggtctggacggaatgggcgaagccagctggcgggccttg
catcagacgcatcgctttgagcatatcttctcctggcttaccctgacgtcagcgcaaata
gccaacacgccaggctttgctaaaggaaaaagcgagcagatatggcggcaatttaacctg
gcgcgccggcagtcgtttacccgctggatcatggcgatggatatccccttaacgcaggct
gcattacaggccagcggcgatcgttcatgggagcagttattaatgcgaacagagcaacac
tggcggcagttaccagcgacgggcgagcgtcgtgccgggagagtcatcgactggcggaat
aatccgcagatcaaaacgctgagcagatggctggctgctcagcatattcccggatttggg
tcttag

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