Sodalis endosymbiont of Henestaris halophilus: HBA_0017
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Entry
HBA_0017 CDS
T05311
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HBA_0017 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0017 (recB)
Enzymes [BR:
seny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HBA_0017 (recB)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HBA_0017 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
AAA_30
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
SNC58299
UniProt:
A0A2C8CVR2
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All DBs
Position
I:34212..37736
Genome browser
AA seq
1174 aa
AA seq
DB search
MTTEQLNLLTLPLHGSRLIEAAAGTGKTYTLAMLYLRLMLGLGGESAYSRPLNVQEILVV
TFTKATAKELRGRIRNNIRQLRMACLEGNSADPLMAALIAQLRDLRWAASHLLAAERQID
EAAIYTIHGFCQHILNYNTVESGMLFNQTLLENESSLNQQFIADFWRRHCYPLPIDVARI
VLQYWEGPEKLLEELLPYLQGEPPMILNPPDITESILARHERIIASINDLKRQWRAASST
LKTILYEYKLDRRVYSNKNILTWLAKTDRWANENTINYQVPDELMRFTSSVLKEKTIGNE
PPQHELFVKIEAFYQQRLSLRELIFSMALVEMRQDLEKEKKSKAEMGFNDLLSSLEKALV
NSGENLSESVRIRYPVVMIDEFQDTDPQQYRIFRRIYSGQSDCGLILIGDPKQAIYAFRN
ADIFTYLLARSEVNCHYTLDTNWRSTPGMINAVNHIFQSLPEPFIFSDIPFVPAIAAEGN
VNFRLVVNNQPQSAMHIWLQPGAGVGVREYQKCMARQCATTIRDWLYAAQEGKAWLEKHQ
GRQTLQASDITVLVHNRKEAALVRDALATLMIPSVYLSNKDSVFKTIEARELQWILQAVL
MPEQDITLRRALATSLLSFNAATINALNNDDQRWEQLIEEFTCYRQRWQKNGIQPMLRQI
MKNYRIAESLLSSQGGQRRLTDVLHLEELLQEASTQLDNEFALIRWLEIQVQSPNPQINN
QQVRLESDHHLVQIITVHKSKGLEFPLVFLPFAANFHTQKRPLFHDRITYSAWLDLNAAP
ESLRLAEEERLSEDLRLLYVALTRSIYHCSIGIAPLCCSNRKKNGASNLHLSALGYLIQQ
GLDSYAYDLREKLAALASRSSGDIVLYEDLLATPAKTIMPIPARTPTLSVRKCPSLPRDT
WRITSYSDLQKHDSSEVIELQLWLDGDAARDCKSKEILPLTQHNFPRGTSTGRFLHSLLE
TLNFNKSLDPQSLNKKLTQQGIDTVWLPIITQWIENILAMPLDNRSISLANIAPDSRHTE
LSFYLLIHSLVQARDIDILCKRYDPLSARCPSLDFPQFTGILKGFIDLVFRWQGRYYILD
YKSNWLGENDSAYTLSAMEQAIITHRYDLQYQLYTLALHRFLRHRIIDYNYQRDFGEVYY
VFLRGINSSMPRNGIFHCRPDIDLIDGLDKLFTG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgaacaacttaaccttcttacattaccgctgcatggtagtcgtcttatcgaa
gcggcagcaggaacgggaaaaacctatactttggcaatgctttatctacgacttatgctt
gggttaggtggcgagtccgcgtattcacgaccattgaatgtacaagaaatattggtggta
acctttacgaaggcaaccgctaaggaactgcgcggccgtatccgtaacaatatacgtcaa
ctgaggatggcctgcctggaaggcaatagcgcggatccactgatggcggcactaatcgcg
caacttagagatttacgatgggccgcatcgcatcttctagcagccgagcggcagatagat
gaagcggcgatttatactatccatggtttctgccagcacatacttaattacaacactgtt
gagtcaggaatgctatttaatcaaacattgctagaaaatgaatcatccttgaaccagcaa
tttatcgctgatttttggcgccgccattgctatccgttgccaatagacgttgcacgaatc
gtactacagtactgggaaggacctgaaaaattgttggaggaattgctaccttatctccag
ggtgaaccaccgatgatacttaatccaccagatataaccgagtctatcttggctcgtcat
gagcgcataatagctagcattaatgaccttaagagacaatggcgcgcggcatcatcaacg
ctaaaaacgatactctacgagtataaactagaccggcgcgtttatagcaataaaaatata
ctaacctggcttgcaaaaaccgatcgctgggcgaatgaaaacaccataaattatcaagta
ccagatgaattaatgcggttcacaagctcagtgttaaaagaaaaaaccataggcaacgaa
ccaccacaacatgaactatttgtcaagatagaggccttttatcaacagagactatcgctg
cgcgaacttattttcagtatggcattggtggaaatgcgtcaagatctagaaaaggaaaaa
aaaagcaaggcggaaatgggattcaacgatttgctaagtagcctggaaaaagcgctagtc
aatagtggtgaaaacctgtcagaatcggtgcgtatacgctatccagtagttatgatcgat
gagtttcaggataccgacccacagcaatatcgcatttttcgccggatttacagcggtcaa
tcagactgcggtctaatattgataggtgaccctaaacaagccatttacgcgtttcgcaac
gcggatatttttacttatctgctagcccgaagtgaagttaattgtcactatacccttgat
accaactggcgttccacaccaggaatgatcaatgcagtaaatcacatatttcaaagcttg
ccagagccatttatttttagcgatattccttttgtaccggcaatagccgccgagggtaac
gtcaatttccgactagttgttaataatcaacctcaatcagcaatgcacatatggctacaa
cctggtgccggcgtaggagtaagagagtaccaaaaatgcatggctcgtcagtgtgctact
accattcgtgactggctttatgcagcgcaggaaggaaaagcgtggctagaaaagcaccaa
gggcgtcaaacactgcaagcgtcagatatcacggtactggtgcacaaccgcaaagaagca
gctctggtacgtgatgcactggcgacacttatgatcccatccgtatatctttctaacaaa
gatagcgtttttaagacgatagaggcacgagaactacaatggattttgcaagcagtgtta
atgccggaacaagatattacactgcgacgcgcactggctacctcactgctaagctttaat
gcagccacaataaatgcgctaaataacgacgatcaacgatgggagcaattgatcgaagag
tttacctgttatcgccagcgctggcaaaaaaatggaatacaaccaatgttgcgtcaaata
atgaaaaattatcgcattgcggaaagcttgttgtcaagccagggggggcaacgtcggctt
acagatgtgctacatttagaagaattgctgcaagaagcctcgacgcaactggataacgaa
tttgcactgattcgttggctagaaattcaagtacaatcccctaatccacaaattaataat
caacaagtgcggctagaaagcgatcaccacctagtacaaatcattacggtgcataaatcc
aaaggtttagaatttccactagtgttcctgccgttcgcggccaatttccacacgcaaaag
cgaccactatttcacgatcgtattacgtacagtgcctggctagatctcaacgcggcacca
gagagtttacggctggcagaagaggagaggctatcggaagatttacgtctgttgtacgta
gcactaacgcgatctatctaccattgcagtatcggtatcgcaccactatgctgcagcaac
cgtaaaaaaaatggtgccagcaatcttcatttaagtgcattaggttaccttattcagcaa
gggctggatagttatgcttatgacctgcgagagaagctagcggcgctagcttctcgttcc
agcggtgatattgtactgtacgaagatttgctcgctaccccagcaaaaactattatgcca
atacctgcacgaacacccacattgagcgtccgaaaatgtccttcgctaccccgagataca
tggcgaatcaccagttattctgatctgcaaaaacacgacagctcggaggtgatagagttg
cagctatggttagacggagatgcagcaagggattgtaagtctaaggaaattctaccgctg
acacagcataactttccgagaggcacgtcaaccggaaggtttttgcatagcctgcttgaa
actttaaattttaacaagtcattagacccacagtcgctcaacaaaaaattaacacaacaa
ggcatcgatactgtttggctaccaataataacgcaatggatagaaaacattcttgctatg
ccgctggataacagatcgatttctctagcaaacattgcgcccgacagccgccatactgaa
ctatctttttatctgcttatacactctttagtacaagcgcgtgatattgatatactctgc
aagcgctatgatccgctttcagcacgttgcccatcgttagattttccgcagtttacggga
atattgaaaggatttattgatctagtttttcgctggcagggccggtattacattctggac
tataaatctaactggctaggggaaaatgattcagcctataccttatcggcgatggaacag
gccataattacccatcgttatgacttgcagtaccaactttatactttagcgctgcatcgt
tttttgcgacaccgcataatagattataattaccagcgcgatttcggcgaggtatattat
gtgtttctacgcggcattaactcgtcaatgccaagaaacggtatttttcattgtcgaccg
gatatcgacttaattgatggacttgataaattatttaccggctaa
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