Staphylococcus epidermidis SEI: DP17_526
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Entry
DP17_526 CDS
T03343
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
seps
Staphylococcus epidermidis SEI
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seps03009
]
DP17_526 (rumA)
Enzymes [BR:
seps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DP17_526 (rumA)
Ribosome biogenesis [BR:
seps03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DP17_526 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
MTS
Met_10
Cons_hypoth95
PrmA
TRAM
N6_N4_Mtase
Methyltransf_11
Methyltransf_12
MethyltransfD12
PCMT
Methyltransf_32
RasGEF_N
TPMT
Motif
Other DBs
NCBI-ProteinID:
AIR83619
LinkDB
All DBs
Position
complement(549051..550421)
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AA seq
456 aa
AA seq
DB search
METIKKNEVKTGKVIDLTHEGHGVVKVDRYPIFIPNALIDEEIKFKLIKVKKNFAIGKLI
EVISESDDRVTPPCIYYAKCGGCQLQHMTYRAQLDMKREQVVNLFHRKGPFENTVIKETI
GMVNPWRYRNKSQIPVGQSNSNQVIMGFYRQRSHDIIDMDSCLIQDRQHQEVMNRVKYWL
NELNISIYNEKTKTGLIRHLVVRTGYHTDEMMVIFVTNGATFKQSELLVNKLKKEFPNIT
SIKQNINNSHSNVIMGRQSMTLYGKDKIEDQLSEVTYHISDLSFYQINSSQTEKLYQQAL
NYAQLTGKEIVLDTYCGIGTIGLYMAPLAKHVYGVEVVPQAIKDAEDNATKNQLKNTTFE
CGKAEDVILTWKSQGIKPDVVMVDPPRKGCDETFLTTLLKLNPKRIVYISCNPSTQQRDA
QILAEQYELVEITPVDMFPQTTHIETVALFVRKDEE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacaattaagaaaaacgaagttaaaacgggaaaggttattgatttaactcatgag
ggacacggagttgttaaagttgatcgatatccaatttttattcctaatgctttaattgat
gaagaaattaaatttaaattaattaaagtgaaaaagaattttgctataggaaaattgata
gaggtcataagtgaaagtgatgatagagtgacaccaccttgtatttattatgcaaagtgt
ggtggttgtcaattacaacatatgacatatagagcgcaattggatatgaaaagagaacaa
gtagttaatctttttcatagaaaaggcccttttgagaatacggttataaaggaaactatt
ggcatggtcaatccctggcgataccgtaataaatctcaaattcctgtaggtcaaagtaac
tcgaatcaagttataatgggattctatagacaacgtagccatgacattatagatatggat
agttgtcttatacaagatagacaacatcaagaagtaatgaatcgagtgaagtactggctc
aatgaattaaatatatctatatataacgaaaaaacaaaaacaggtttaatacgtcattta
gtagtaagaactggttatcataccgatgaaatgatggttatctttgttacaaatggagca
acatttaaacaatcagaactattagtaaacaagctaaaaaaagaatttccaaatataaca
agtattaaacagaatataaacaatagccactctaatgtcataatggggcgtcaatcaatg
actttatatggtaaagataaaattgaagaccaattaagtgaagtaacttatcatatttca
gatttatcattttaccaaattaactcatcacaaactgaaaaactttatcagcaagctctg
aattatgctcaattaacaggaaaagaaatagtattggatacgtattgtggtataggaacg
attggtctatatatggcaccactagcaaaacatgtttatggtgtagaagttgttccgcaa
gccataaaagatgcggaagacaatgcgactaaaaaccaacttaaaaatacgactttcgaa
tgtggaaaagcagaagatgttatcttaacatggaaatcacaagggattaaaccagacgta
gtcatggtagatccacctagaaaaggatgcgatgaaactttcttaactactcttttaaaa
ttaaatccgaaaaggattgtttatatatcatgtaacccttcaacgcaacaaagagatgcg
caaatattggctgaacaatatgagttagtagaaattacaccagttgatatgttcccacaa
acaactcatattgagactgtagcattatttgtacgtaaagacgaagagtga
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