Prodigiosinella confusarubida ATCC 39006: Ser39006_018840
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Entry
Ser39006_018840 CDS
T05290
Name
(GenBank) mechanosensitive channel MscK
KO
K05802
potassium-dependent mechanosensitive channel
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_018840
Transporters [BR:
sera02000
]
Other transporters
Pores ion channels [TC:
1
]
Ser39006_018840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AUH06001
UniProt:
A0A2I5TAS3
LinkDB
All DBs
Position
complement(4140110..4143460)
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AA seq
1116 aa
AA seq
DB search
MVYWPVVSLRLRSVFSDYRLDVVFCHMLHISMICFAILLFSPAVEAGSDLPTHSEIQNRL
NILNKQKNLTPMDKLTQQDLTQTLDVLDTIDRVKQETSQLKQQAAQAPAKLKQVSGDLDA
LNATSEDDVPKSLESLSLKQLEARLNETLNDLQSAQENLSTYNSQLISLQTQPERVQSAL
VAALQRSQKLRNQLNGLDSNQAPLRSSQQVLLQAEQVLVTLQMEQQRKSLEVNTTLQDLL
QKQRDYTAAQINQLERMVQALQGIINGKRLNLSEKTAKEAQNSEDLQRIQENPLVKTEMD
INQKLSQRLIKATEESNTLVQQTIQVKNWLDRASQSERNLKEQVTVLKGSLLLSRILYQQ
QLNLPSADSLSDMSAQIADLRLEQFDINQQRDVLFRGDEYIQKLLARSNKPVDAEVTDAL
GQVLDMRRELLDQLNKQLGNQLMLAINLQINRQQLLGINTSLQHTLTQQIFWVNSNKPMD
WSWLEDLPSALKQQVNDLHLTLKPAQLLQGTLQSLLFVVPSLLAIGLIYWRRKAIDNYMN
KLSDDVGQLKRDSQLHTPQFILLVVLKTLPGVLIILTLGIWLKKMDSQISSFSWLLSENL
ALLWLVFGMTYISLKPGGLCERHFSIPSSRCAHYRRQTVRLGSALLPLVFWSVIGDKMPL
YLADDVIGQIIIVCNLILLTVLVFPLCRDSWREKERHTARLIIVTAIVLMPLFLIGLMFN
GYFYTTLRLSARWIETLCLWMVWNTVYMTIIRGLSVAARRLAYRRALARRQNMAKEGAEG
SEPVPEAPLALEQISQQSLRLATMVMLLIFSVAFYWIWSELITVFSYLDSITLWHYNTSV
AGSSVLQAVTLGNLLVALLIIAVAYVMTRNLPGLLEVLVLSRLQLRQGTSYAITTMLTYL
ITIIGAATSLSSMGVSWDKLQWLVAALSVGLGFGLQEIFANFVSGLIILFERPVRIGDTI
TIGSFSGGVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLSDTITRVIIRIGVAYG
SDLEKVKEVLLQAARENPRVMVDPEPLVFFLEFGASSLDHELRLYVRELGDRSYTVDELN
RAIDRLCRENNINIAFNQLEVYLHNTQGAEFKEVSR
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggtttactggccagtggtttcgctccgtcttcgttcagttttttctgattatcgcctc
gatgttgtgttttgtcatatgttacacatatcgatgatatgttttgccatactcttgttt
tcacctgcggtggaagctggaagtgatttgccaacgcatagtgaaatccaaaatcggctg
aatatactgaataaacaaaaaaacctcacgccgatggataagctgacccagcaggattta
acacaaactcttgatgtattggataccattgatcgggtaaagcaggagactagtcagctt
aaacagcaggcggcgcaggcgcctgccaaattaaaacaggtcagtggagatctggatgcc
ctcaatgcgacgagcgaggatgatgtacctaaatcattagaatctctatccctcaaacag
ctcgaagcacgtttgaacgaaaccctgaatgatttacaatctgctcaggaaaacctttct
acctacaacagtcagttaatttctctgcaaactcaaccagagcgtgtacaaagcgctctg
gttgctgctttgcagcgtagccagaagttacgtaaccaactcaatggattggactcgaat
caagcgcctttgcgttcaagtcagcaggtattgttgcaggcagagcaagttctggtgacg
ttgcaaatggagcagcaacgtaaaagcctggaggtgaatacgaccttgcaggatttatta
cagaaacagcgtgattatactgcggcacaaattaaccaactggaacgcatggttcaggca
ctgcaaggcattattaatggcaagcgtctgaacctttctgaaaaaacagccaaagaagcg
caaaattccgaagatttacaacgcatccaagaaaatccattagtgaaaacagaaatggat
ataaatcaaaagcttagtcagcgcttaatcaaggctaccgaagagagcaatacgctggtc
cagcaaactattcaggtaaaaaactggttggatcgcgcctctcagtctgagcgtaatctg
aaagagcaggtgacagtattaaaaggcagtttgttattatcgcggattctctatcagcag
cagcttaacctgccttctgctgattcactgagtgacatgagtgcgcagattgctgactta
cgtcttgagcaattcgatattaatcagcaacgtgatgtgttatttcgcggagatgaatat
atccagaaattgttagcacgtagtaataagccggttgatgcggaagtaaccgatgctctg
ggacaagtgctggacatgcgaagagagttgcttgatcagctcaataagcaactgggtaat
caactgatgttggctataaacctacaaatcaacaggcagcagttactgggtattaatacc
tctttgcagcacacgttaacgcagcagatcttctgggtaaacagcaataaaccaatggat
tggagctggctggaagatttgccatcagcactgaagcagcaggtaaatgatctgcatctg
acgctgaagccagcacaattattgcagggcacactgcaatcactgttgtttgtggtgcca
tcattgcttgctatcgggctgatttattggcgacgcaaggcgattgataactacatgaac
aagctgtcggatgatgtcggtcagcttaagcgagacagtcagcttcacacgccgcagttt
attctgctggttgtgttaaaaaccttacccggggtgctgattattcttaccttggggata
tggttgaaaaagatggatagccagatcagcagtttttcctggctactgagtgaaaatcta
gcgttgctctggctggtattcgggatgacttatatcagcttgaaacccggtggtctttgt
gaacgccattttagtattccgtcctcacgttgcgcgcattatcgccgacaaacggtgagg
ctggggagcgcattactaccgctggttttttggtcagtgatcggcgataaaatgccactt
tatctggctgacgatgttattgggcagattattatcgtttgtaacctgattttgctgact
gttctggttttcccgttgtgccgagacagttggcgtgaaaaagagcgtcatactgccagg
cttatcattgtgactgccattgttctcatgccgctattcctgattggcttgatgttcaat
ggttatttctatactaccttacgactatcggcacgctggatagaaacactctgtctatgg
atggtatggaatactgtttatatgacaataatccgaggactcagtgttgcggcccggcgt
ctggcttatcgtcgcgcgctggcaagacggcagaatatggctaaagagggcgcggaaggc
agtgagccagttccagaagcacctctggcgctagagcagatcagtcaacagtcgttgcgt
ttggccacgatggtgatgttgcttattttttccgtggcgttctactggatttggtcagag
ctgatcaccgtattctcttacctggacagcattacgttgtggcactacaacacctctgtt
gctggcagtagtgttttgcaggcggtgacactgggtaatcttctggtcgcattgttgatt
attgctgtggcttatgtgatgacccgaaatctccccggtttgctggaggtactggttctt
tcccgactccaactacgtcaggggacatcctatgccattaccacaatgttgacttatctg
attacgatcatcggtgccgcaacttctttaagttcaatgggcgtatcatgggataagctg
caatggttggtggcagcattatctgtcggattaggtttcggcttgcaggagatattcgcc
aactttgtctctggtctgattattttgttcgagcgtccggtgcgcatcggcgacaccatc
accattggttcgttttccgggggagtgagcaaaatccgtattcgtgccaccacgattacg
gatttcgaccgcaaggaagtcatcatccccaataaggcctttgtgacagagcggctgatc
aactggtcactgtcagatacgattacgcgtgtcattattcgtattggtgtggcgtatggc
tcggatctggagaaagtaaaagaggtgttgttacaggcggctcgggagaaccctcgagtt
atggttgatcctgaaccactagtttttttcctggagtttggtgccagctcattggatcac
gagctgcggttgtatgtccgggaactgggtgaccgcagctataccgtggatgaactcaat
cgagcgattgatcgcctgtgccgggaaaataatattaatattgctttcaatcagttggaa
gtttatctgcataacactcagggcgctgagtttaaagaagtttcccgctaa
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