Serinicoccus hydrothermalis: SGUI_1071
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Entry
SGUI_1071 CDS
T04436
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGUI_1071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serj03019
]
SGUI_1071
03016 Transfer RNA biogenesis [BR:
serj03016
]
SGUI_1071
Enzymes [BR:
serj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SGUI_1071
Messenger RNA biogenesis [BR:
serj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGUI_1071
Transfer RNA biogenesis [BR:
serj03016
]
Prokaryotic type
tRNA degradation factors
SGUI_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH_2
KhpA-B_KH
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ANS78467
UniProt:
A0A1B1NAK6
LinkDB
All DBs
Position
complement(1182860..1185343)
Genome browser
AA seq
827 aa
AA seq
DB search
MEGPEITAAEATIDNGSFGTRTVRFETGRLAKQAGGSVTAYLDDETMLLSTTTASKHPKD
HFDFFPLTVDVEEKMYALGKIPGSFFRREGRPSTDAILTCRLIDRPLRPTFAKGLRNEVQ
VVITVLSLDPDHQYDVLAINAASASTQISGLPFSGPIGGVRMSLVDGQWVAFPNFSDAER
STFDMVVAGRVVEDDVAIMMVEAESTESTWDLVNSEGKQAPTEEVVAQGLEASKTFIKVL
CEAQAELATAAAKEVEEFPRFLDYEDDAYTAVEEAVTGDLTAALQIAGKAEREDRLDEIK
VAMKEKLLGLHWDAAGDSDDREDAPFHGRDKELDAAYRAVQKKLIRERILRDEVRIDGRG
LKDIRALSAEVEVIPRAHGSAIFERGETQIMGVTTLNMLRMEQQLDTLSPVSRKRYMHNY
NFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPTREEFPYAIRQVSEALGSNGSTSM
GSVCASTMSLLNAGVPLRAPVAGIAMGLVSAQVDGQTQYAALTDILGAEDAFGDMDFKVA
GTREFVTAIQLDTKLDGIPADVLAGALTQARDARMHILDVMNEAIDAPDEMSPYAPRVIS
VRVPTDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVYIGATDGPSAEAARAAINAIAN
PQMPEIGERFLGTVVKTTTFGAFVSLLPGKDGLLHISEIRKLVGGKRIDAVEDVLGVGQK
VQVELKEIDPRGKLSLAAVVAQEQGGEAQPAGDAADAGEPSRADAAEAPEVAERAPQTEQ
GESTDDAGDQGADEGGERPRRQRRRRGGRGRGGNGGGNGTESGDSAD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagagatcaccgccgccgaagccacgatcgacaacggcagcttcggcacc
cgcaccgtccggttcgagaccgggcgcctggccaagcaggccggcggctccgtcaccgcc
tacctcgacgacgagacgatgctgctgtccaccaccacggccagcaagcaccccaaggac
cacttcgacttcttcccgctgacggtggacgtcgaggagaagatgtatgccctcggcaag
atcccgggcagcttcttccgccgtgagggtcgcccgtccacggacgccatcctcacctgc
cggctgatcgaccgcccgctgcgcccgaccttcgccaagggcctgcgcaacgaggtccag
gtcgtcatcaccgtgctgtcgctcgacccggaccaccagtacgacgtgctcgcgatcaac
gccgcgtccgcctccacccagatctccggcctgcccttcagcggtccgatcggtggcgtg
cggatgtcgctcgtcgacggccagtgggtcgccttcccgaacttctccgacgccgagcgc
tcgaccttcgacatggtcgtcgcgggtcgcgtggtcgaggacgacgtcgccatcatgatg
gtcgaggccgagtccaccgagtccacctgggacctcgtcaacagcgagggcaagcaggcc
ccgaccgaggaggtcgtcgcccagggcctggaggcgtccaagacgttcatcaaggtcctc
tgcgaggcgcaggccgagctggccaccgccgccgccaaggaggtggaggagttcccgcgc
ttcctcgactacgaggacgacgcctacaccgccgtcgaggaggccgtcaccggtgacctc
accgcggcgctgcagatcgcgggcaaggccgagcgcgaggaccgcctcgacgagatcaag
gtcgcgatgaaggagaagctgctcggcctgcactgggacgcggccggcgactccgacgac
cgcgaggacgctcccttccacgggcgcgacaaggagctggacgcggcataccgcgccgtg
cagaagaagctcatccgcgagcgcatcctgcgcgacgaggtccgcatcgacggccgtggc
ctcaaggacatccgcgcgctctccgccgaggtggaggtcatcccgcgggcgcacggctcg
gcgatcttcgagcgcggcgagacccagatcatgggcgtcaccacgctcaacatgctgcgc
atggagcagcagctcgacaccctctccccggtgtcgcgcaagcgctacatgcacaactac
aacttcccgccctactcgaccggtgagaccggccgcgtcggctccccgaagcgccgcgag
atcggccacggggcgctcgccgagcgtgccctcatgccggtcctgccgacccgcgaggag
ttcccctacgcgatccggcaggtctccgaggcgctcggctccaacgggtcgacctcgatg
ggctcggtctgcgcgtccacgatgtcgctgctcaacgctggtgtgccgctgcgcgcgccg
gtcgcgggcatcgcgatgggcctggtctcggcgcaggtcgacgggcagacgcagtatgcc
gccctcaccgacatcctcggcgccgaggacgccttcggcgacatggacttcaaggtcgcc
ggcacccgggagttcgtcaccgcgatccagctggacaccaagctggacggcatccccgcc
gacgtcctggccggggcgctgacccaggcccgcgacgcccggatgcacatcctggacgtc
atgaacgaggcgatcgacgccccggacgagatgagcccctacgccccgcgcgtcatctcg
gtccgcgtgcccaccgacaagatcggtgaggtcatcggcccgaagggcaagatgatcaac
cagatccaggaggacaccggcgccgacatctcgatcgaggacgacggcacggtctacatc
ggtgcgaccgacggcccgtcggccgaggccgcccgggccgcgatcaacgcgatcgccaac
ccgcagatgccggagatcggcgagcgcttcctcgggactgtggtcaagaccacgaccttc
ggggcgttcgtgtcgctgctgccgggcaaggacggcctgctgcacatctccgagatccgc
aagctcgtcggcggcaagcgcatcgacgcggtcgaggacgtgctgggcgtgggccagaag
gtccaggtcgagctcaaggagatcgacccgcgcggcaagctctcgctggccgccgtcgtg
gcgcaggagcagggcggcgaggcgcagccggccggtgacgccgccgacgccggtgagccc
agccgggccgacgccgccgaggcgccggaggtggccgagcgggccccgcagaccgagcag
ggcgagtccacggacgacgccggcgaccagggcgctgacgagggcggcgagcgcccgcgt
cgtcagcgccgccgacgcggtggccgcggtcgcggtggcaacggtggcggcaacggcacc
gagtcgggggactccgccgactga
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