Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_06625
Help
Entry
CFSAN001921_06625 CDS
T02737
Symbol
cbiD
Name
(GenBank) cobalt-precorrin-6A synthase
KO
K02188
cobalt-precorrin-5B (C1)-methyltransferase [EC:
2.1.1.195
]
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc00860
Porphyrin metabolism
setc01100
Metabolic pathways
setc01240
Biosynthesis of cofactors
Module
setc_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CFSAN001921_06625 (cbiD)
Enzymes [BR:
setc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.195 cobalt-precorrin-5B (C1)-methyltransferase
CFSAN001921_06625 (cbiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CbiD
DUF3042
Urease_linker
Motif
Other DBs
NCBI-ProteinID:
AGQ67488
LinkDB
All DBs
Position
1405950..1407089
Genome browser
AA seq
379 aa
AA seq
DB search
MSELSFDAPVWHHGKALRKGYTTGSCATAAAKVAALMVLRQHLIHQVSIVTPSGVTLCLN
VESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGIG
LPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEARAQKTYNSRLGILGGISII
GTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMS
NFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPL
ELLTLVSDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFD
NHILGSNRPVDEIAKELQC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctttcttttgacgcgccggtctggcaccacggtaaagcgttacgtaaagga
tataccaccggttcctgcgcgacggcggcggcaaaagtcgccgcgctgatggtattacgt
caacatctgattcatcaggtctccatcgtcacgccgtcgggcgtcacgctatgcctgaac
gtggagtcgccgcacattgaaggccagcaggcgatagccgcaattcgtaaagatggcggc
gatgacgtggatgccacgcacggaatgctgatttttgcccgcgttacgctcaacgacagc
ggtgagattacgctcactggcggcgaaggtattggtacggtaacgcgtaaagggattgga
ctgccgctcgggagcgccgccatcaatcgtacgccgcgccataccattgagtcagcggtg
cgcgaagcgataggcccggcgcgtggggccgatgtggagatttttgccccggaaggcgaa
gcgcgggcgcaaaaaacgtataactcgcggcttggcattcttggcggcatttccattatt
ggcactaccggcattgtgacgccgatgtcggaagaaagctggaaacgctcgctatcgctg
gaactggagatcaaacgggcgtcaggattaacgcgggtgatactcgtgccgggcaaccac
ggcgaacggtttgttcgcgaacaaatgggcgtcgacacacaggcagtcgtcaccatgagc
aattttgtcggctacatgattgaagaggcggtacggctgggattttgccagatagtgctg
gtgggtcatcctggaaaattgatcaaaatcgccgccgggatctttcatacccatagccat
attgccgatgcgcgcatggaaacgctggtcgcgcatttagctttactgggcgcgccgctg
gagttactcaccctggtcagcgattgcgataccaccgaagcggcaatggagcacattgaa
gcatatggcttcgggcatatctataaccatcttgccaggcgtatttgtttgcgagtcatg
cagatgctgcgttttaccaaaacgccgcctgtctgcgacgccatcctgttttcttttgat
aaccatattctcggcagtaatcgtcccgtcgacgagattgctaaggagctgcaatgctaa
DBGET
integrated database retrieval system