Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_06720
Help
Entry
STU288_06720 CDS
T02639
Name
(GenBank) E3 ubiquitin-protein ligase SopA
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SopA_C
SopA
Pentapeptide
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-ProteinID:
AGK08952
LinkDB
All DBs
Position
1356328..1358676
Genome browser
AA seq
782 aa
AA seq
DB search
MKISSGAINFSTIPNQVKKLITSIREHTKNGLTSKITSVKNTHTSLNEKFKTGKDSPIEF
ALPQKIKDFFQPKDKNTLNKTLITVKNIKDTNNAGKKNISAEDVSKMNAAFMRKHIANQT
CDYNYRMTGAAPLPGGVSVSANNRPTVSEGRTPPVSPSLSLQATSSPSSPADWAKKLTDA
VLRQKAGETLTAADRDFSNADFRNITFSKILPPSFMERDGDIIKGFNFSNSKFTYSDISH
LHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQQQPSFIDTTLKNTLIRHKAN
LSGVILNEPDNSSPPSVSGGGNFIRLGDIWLQMPLLWTENAVDGFLNHEHNNGKSILMTI
DSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGP
VQERFFAHQCQTYNDVPLPAPDTYYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMT
GVDCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWTTRAADNFLLLSSQDSD
TAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDFPVFLAAFNQQA
TQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLPEGKL
SPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYSSSAIFGTEHDSPPALRGYAEALM
QKAWELSPAIFPSSEQFTEWSDRFHGLHGAFTCTSVVADSMQRHARKYFPSVLSSILPLA
WA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatcatcaggcgcaattaatttttctactattcctaaccaggttaaaaaatta
attacctctattcgtgaacatacgaaaaacgggctcacctcaaaaataaccagtgttaaa
aacacgcatacatctttaaatgaaaaatttaaaacaggaaaggactcaccgattgagttc
gcgttaccacaaaaaataaaagacttctttcagccgaaagataaaaacaccttaaacaaa
acattgattactgttaaaaatattaaagatacaaataatgcaggcaagaaaaatatttca
gcagaagatgtctcaaaaatgaatgcagcattcatgcgtaagcatattgcaaatcaaaca
tgtgattataattacagaatgacaggtgcggccccgctccccggtggagtctctgtatca
gccaataacaggcccacggtttctgaaggtagaacaccaccagtatccccctccctctca
cttcaggctacctcttccccgtcatcacctgccgactgggctaagaaactcacggatgca
gttttacgacagaaagccggagaaacccttacggccgcagatcgcgatttttcaaacgca
gatttccgtaatattacattcagcaaaatattgccccccagcttcatggagcgagacggc
gatattattaaggggttcaacttttcaaattcaaaatttacttattctgatatatctcat
ttacattttgacgaatgccgattcacttattcgacactgagtgatgtagtctgcagtaat
acgaaatttagtaattcagacatgaatgaagtgtttttacagtattcaattactacacaa
caacagccctcgtttattgatacaacattaaaaaatacgcttatacgtcacaaagccaac
ctctctggcgttattttaaatgaaccggataattcatcacctccgtcagtgtcagggggc
ggaaattttattcgtctaggtgatatctggctgcaaatgccactcctttggactgagaac
gctgtggatggatttttaaatcatgagcacaataatggtaaaagtattctgatgaccatt
gacagcctgcccgataaatacagtcaggaaaaagtccaggcaatggaagacctggttaag
tcattgcggggtggccgcttaacagaggcatgtatccggccagttgaaagttcgctggta
agcgtactggcccaccccccctatacgcaaagtgcgcttatcagcgagtggctcgggcct
gttcaggaacgtttttttgcccaccagtgccagacctataatgacgttcccctgccggct
cctgacacatattatcagcagcgcatactgcctgtgttgctggattcgtttgacaggaac
agcgccgccatgaccactcacagcggactctttaatcaggtgattttacactgtatgaca
ggcgtggactgcactgatggcacccgccagaaagctgcagcgctttatgaacagtatctt
gctcacccggcggtgtctccccacatccataatgggctcttcggcaattatgatggcagc
ccggactggacaacccgcgctgcagataatttcctgctgctttcctcccaagattcagac
acggcgatgatgctctccactgacacgctgttaacaatgctaaaccctactcctgacact
gcatgggacaacttttacctgctgcgagccggagagaacgtttccaccgcgcaaatctct
ccggtagagttattccgtcatgactttccggtgtttctcgccgcatttaatcagcaggcc
acgcagcgacgctttggggagctgattgatatcatcctcagcactgaagagcacggggag
ctgaaccagcagtttcttgccgccacgaaccagaaacattccaccgtgaagttgattgat
gatgcctcagtgtcgcgtctggccaccatttttgaccccttgcttcctgaaggcaaactc
agcccggcacactaccagcacatcctcagtgcttatcacctgacggacgccaccccacag
aagcaggcggaaaccctgttctgtctcagtaccgcattcgcacgctattcctccagcgcc
attttcggcactgagcatgactctccgccggccctgagaggctatgcggaggcgctgatg
cagaaagcctgggagctgtctccggcgatattcccatccagcgaacagtttaccgagtgg
tccgaccgttttcacggcctccatggcgcctttacctgtaccagcgttgtggcggatagt
atgcaacgtcatgccagaaaatatttcccgagtgttctgtcatccatcctgccactggcc
tgggcgtag
DBGET
integrated database retrieval system