Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_11110
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Entry
STBHUCCB_11110 CDS
T01741
Name
(GenBank) Pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sex03000
]
STBHUCCB_11110
Transcription factors [BR:
sex03000
]
Prokaryotic type
Helix-turn-helix
IclR family
STBHUCCB_11110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_24
HTH_11
HTH_5
TrmB
HTH_26
MarR_2
Fe_dep_repress
Mga
HTH_45
MarR
FUR
Rrf2
HTH_6
PadR
HTH_34
Dimerisation2-like_dom
Motif
Other DBs
NCBI-ProteinID:
AEZ44826
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Position
1120042..1120833
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AA seq
263 aa
AA seq
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MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY
VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSRLTKETIHLGALDEDSIVY
IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILDGVEYKQSTGRTITST
EALLPLLDEVRAQGYGEDNEEQEEGLRCIGVPVFDRFGVVIAGLSISFPTLRFSEERLQE
YVAMLHVAARKISEQMGYNDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcagatctggataagcagcctgattctgtatcttctgtgctgaaagttttc
ggcattctgcaggcgctgggtgaagagcgtgaaatagggattaccgagctatcgcagcgc
gtcatgatgtcgaaaagcaccgtttatcgctttttgcaaaccatgaaaacgctgggctac
gtggctcaggagggggagtctgaaaaatactctctgacgctaaagctgtttgagctgggc
gcgcgagctttgcaaaatgttgatctcatccgcagtgcggacattcagatgcgcgaactg
tctcgtctgacaaaagaaactatccatcttggcgcgctggatgaagacagcattgtctat
atccataaaattgactctatgtacaatctgcggatgtactcacgtattgggcgtcgtaat
ccgctgtacagtacggccatcggtaaagtgcttctggcctggcgcgaccgtgatgaggtt
aagcagattctcgacggcgtagagtataagcaaagcacgggacgcacgattaccagcact
gaagcgttgctgccgctgttggatgaagtgcgtgcgcaaggctacggtgaagataacgaa
gaacaggaagaagggttacgttgtatcggcgtaccggtatttgaccgttttggcgtagtc
atcgcagggttaagcatttcgttcccgacgctgcgtttttcagaagaacgcctacaggaa
tatgtggctatgttacacgtcgccgcgcgtaaaatttctgaacaaatgggttacaacgat
tatcccttctaa
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