Shigella flexneri 301 (serotype 2a): SF3723
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Entry
SF3723 CDS
T00097
Symbol
lpfC
Name
(RefSeq) long polar fimbriae
KO
K07347
outer membrane usher protein
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SF3723 (lpfC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfl02000
]
SF3723 (lpfC)
02044 Secretion system [BR:
sfl02044
]
SF3723 (lpfC)
02035 Bacterial motility proteins [BR:
sfl02035
]
SF3723 (lpfC)
Transporters [BR:
sfl02000
]
Other transporters
Pores ion channels [TC:
1
]
SF3723 (lpfC)
Secretion system [BR:
sfl02044
]
Chaperone-usher system
Type 1 pilus assembly protein
SF3723 (lpfC)
Bacterial motility proteins [BR:
sfl02035
]
Pilus system
Fimbrial proteins
SF3723 (lpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-GeneID:
1026169
NCBI-ProteinID:
NP_709462
UniProt:
Q83PM2
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All DBs
Position
3831822..3834344
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AA seq
840 aa
AA seq
DB search
MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEINHQSGVDIRQFNRANLMPPGVYSV
DIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDP
APRIEGSSWQFDSDKLQLNISIHQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLR
SDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIM
IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQ
SAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGLTDVDVSVGE
LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVTHA
RANFSHDDTETGQSYRFLYSKLFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE
TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWS
YSNTARQGTGNNHASDNTSEQIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSG
TALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGIL
AHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD
NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDA
SLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSFSTPESESGLIEQGVTCH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaccagaatagtggttggcctcacggcagggacgtgtctgattttctcgcaa
aacctgatggccgaggtcagtgtattcaatccggcgcttctggaaatcaaccatcaatcc
ggagtcgatattcgccagtttaatcgggcaaacctgatgcccccaggtgtttatagcgtt
gatatttttatcaacggtaaaatgtttgaacgtcaggatgtgacatttgttcaggataat
ccagatgctgatctgcacgcttgctttattgccattaaaaaaacactgtcctcctttggc
ataaaagttgatgcgctcaaatcgttcaatgatgtggatgagacggtttgcctcgatcct
gctccacgtattgaaggctcatcctggcagtttgacagtgataaattgcagctgaatata
tccattcaccaaatctacatggacgcgatggcttatgattacatcagccccacgcgttgg
gatgaggggattaatgcgctcaccatcaactacgatttttctggttcacatacactacgt
tcagattatggttcacaagagacagataccagttatctcaatctgcgcaatggactgaat
attggaccgtggcggctacgtaattacagtactttaaacaccagcgatggccgtgcggaa
tacaactccattagtacctggatacagcgcgatattgccgcgttaagaagccagattatg
attggtgatacgtggacggcgagcgatattttcgacagtacgcaaattcgcggcgcgcgt
ttgtatactgataacgatatgctacccgccagccagaatggctttgctcctgtggttcgt
gggattgcaaagtccaacgccaccgtcatcattcggcagaatggctacgtgatttatcag
tcagccgttccacaaggtgcttttgagatcaccgatctcaacaccgcaagtacaggtggc
gatttggacgtaaccatcaaagaagaagacggtagcgaacaacgattcacccaaccttat
gcttcattggcgattcttaaacgtgaaggtctgacagatgttgatgtcagcgtgggtgaa
ttgcgcgatgaagacggatttacaccggacgtccttcaggcgcaaatacttcatggtttt
tcccacgggatcactttatatggaggtatgcaggctgctgaaaattatggttctgcagct
ctgggtgtcggtaaagatcttggcgctttgggcgcaatttctttcgatgtgacacatgct
cgtgcgaattttagccatgatgatacagaaacgggtcagtcatatcgctttctctattca
aaactatttgacgacacagacactagcttgcgcctggttggctatcgttactccaccgag
ggctactataccctcaatgagtgggcatcgcggcgcaacagccctgaagacttttgggaa
acaggtaaccgacgtagtcgcgtggagggaacgctaacgcagtcgttggggagagattat
ggcaatttatacctgacattaagccggcaacaatactggcataccgatgatgtcgaacga
ttaatgcaatttggctacagcagtagctggaagcgtctctcgtggaacgtctcctggagt
tattccaatactgccagacaggggacggggaacaaccatgccagtgataacaccagtgag
cagatctacatgctctctttatctgttcctttatcgggctggtggggtaatagttacgcc
acctattctgtttcgcaaaacgataattccggtagctcacatcaactcggactcagcggt
acggcgctggaaagaaataacctttcatggaatttaatgcagtcctataacagtcatgat
gatgaggttggcggtaatatgtccctgacctatgatggctcttatggcacggtgaacggc
agctataactacagccaaaattcccagaggctgaattatggtatcagagggggaattctg
gcacacagcgaaggggtaacgttaagtcaggagttaggtgaaactattgctcttgttaaa
gcacctggggccgccgggttagaaatagataatatgcgcggtgctgcgacggactggcgc
ggctatacggtcaagacacagctaaacccttatgatgaaaatcgggtagcaatcagcgat
aactatttctcgaagtcgaatatagaacttgataataccgtcgttacgatggttcccacg
cgtggtgcagtggttaaagcggagtttgtgactcatgtgggttatcgcgttctcttcaga
gtgttaaatgcaaatggtaaaccggtaccttttggagccattgctgcgatacaagatgca
agtttggcagattcaggaattgtcggtgaccgtggcgaactttatctttctggtctacca
gaaaaaggacaggttacgttatcctggggagaaaacgcctcaacaaaatgcatcttcaat
tattcattttcgacaccagaaagtgagagcggattaattgaacagggtgtgacatgtcat
taa
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