KEGG   Scleropages formosus (Asian bonytongue): 108919978Help
Entry
108919978         CDS       T04919                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sfm00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    108919978 (lig4)
Enzymes [BR:sfm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108919978 (lig4)
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     108919978 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 909 aa AA seqDB search
MEASTSSEDVPQTSVAAQVPFRHLCTTLEKIQKAKARPEKAKCLSDFIDSWRKFHSALHK
DKPKTPDSFYPALRLIVPQFERERMAYGIKESMLAKLFIEVLGLPKNGPESNKLLNYRAP
TTSQGEAGDFAIMAYFVLKKRCMSQGNLTIKEVNDFLDSVAVNNAAKKKDLVKKNLLHLI
THSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAVELYNVTTDLCKVCQKLHDPSVNL
SDVSIELFSAFKPMLAAVANIKQVEKQMSNHSFYIETKLDGERIQLHKDGDVYKYFTRNS
FEYTQQFGASPLEGSLTPYIHDVFKPHVIRCILDGEMMAYNPTAETFMQKGSKFDIKRLV
EDSDLQTCFCIFDVLLVNDQKFGHETLKKRYETLHTVFTPIKGRMHLVPKKEARTMQEVV
NALNEAIDNREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDGLMDELDLLILGGYWGKGT
RGGMISHFLCGVSETPKPGEKPTVFHSLCRIGSGYTMKELYDLGLKLAKHWKLFRKTNPP
ASILCGTEKPEVYIDPCNSVIIQVKAAEIVGSDMYKTTCTLRFPRIERIREDKEWHQCMT
LDDLDQFRNKCSGKLASRHLCVNEDEPEKKKRKVVAKPKKVIGIIDHFKSQDLSGVTKES
SMFEDVEFCIMNGSEEHPKADLEKGVVKCGGNVVQNPSQDTYCVIAGVVNMRVKNLISCN
QHDVVWAPWLLECLEKKQFVPWQPRHMIHMSPSTQQHFAKEYDKFGDSYYADTNEQELKE
VFSRVDIKDKEMPSIANVESQYALDDLPTNMFRPFRVYLDRCTEIGDPRSLICGTCLDIR
ALEFRFHGGTVVSELTEGVTHVIVAEETRLLDFRTLRRLFAKKFKIVRESWVTDCIKAGH
LLNDNEYLV
NT seq 2730 nt NT seq  +upstreamnt  +downstreamnt
atggaagcatcaacaagtagtgaagacgtgcctcagacatctgtagctgctcaggttcca
tttcggcatttatgtacaaccttagagaaaatacagaaagcgaaggctcggccagagaaa
gccaagtgtctctccgatttcattgattcatggcgaaagtttcattccgctcttcacaag
gacaaaccaaagacccctgactccttctatccagccttacgtctcatcgttccccagttt
gagagggaacggatggcttatgggatcaaggaaagcatgttagcaaaactgttcattgaa
gtcttgggccttccaaaaaatggtccagagtcaaataaacttctcaactatagagctcca
actacgtctcagggggaggcaggtgattttgccatcatggcttactttgttttgaagaag
aggtgtatgagccagggaaacctaactattaaagaggtaaacgatttcttggattcagtt
gctgtcaacaatgctgctaaaaagaaggatcttgtcaagaaaaaccttctacatctgata
acgcatagctcagccttggagcagaagtggctaatcagaatgatcctgaaagacatgaag
ttgggcataagcaaagagacagtgcttcaagtgttccatccagatgctgtggagttgtac
aatgtcacaactgatctttgcaaagtgtgccagaagcttcatgatccttctgtgaatctt
agtgatgtgtccattgagctgttttcagctttcaagcccatgctagcagctgttgccaac
atcaagcaggtagagaagcaaatgagcaatcacagtttctatattgagacaaagctggat
ggtgaacgcatccaactgcataaagatggagatgtgtacaagtattttacacgcaactct
tttgaatacactcaacaatttggggcatccccgttagaaggctctttgaccccttacatt
catgatgtcttcaagcctcatgtgataaggtgcatcttggatggtgagatgatggcatac
aaccccactgctgaaacctttatgcaaaagggaagcaagtttgatatcaaaaggctagtt
gaggattctgatctccaaacctgtttttgcatctttgatgttcttttagttaatgaccag
aaatttggacatgagacactaaagaaacgttatgaaactctgcatactgtcttcactcca
ataaagggccgaatgcatttggtgccaaaaaaagaagctcgaaccatgcaagaagtggtg
aatgccttaaatgaagcaatcgacaacagagaagaaggaatcatggtaaaagatccctta
tctatttataaaccagacaagagaggagaagggtggctcaagataaaaccggaatacgtg
gatggtctgatggatgagcttgacctgttgatccttgggggctactgggggaaaggaact
cgaggtgggatgatttctcattttttgtgtggtgtatcagaaactcctaaacctggagag
aagccaacagtgtttcattctctctgccgcataggttcaggctacaccatgaaggagctg
tatgatttgggcctaaagcttgctaagcactggaagctcttccgtaaaacaaatccgcca
gcatccatactatgtggcacagagaaaccagaagtttacattgatccctgtaattcagtg
attattcaggttaaggctgctgaaatagtgggtagtgatatgtataaaacaacttgcact
ctccgttttcctaggattgagaggatcagagaagataaggaatggcaccaatgcatgaca
ctagatgatcttgaccagttcaggaataagtgctctggaaaactagcatcaaggcaccta
tgtgtcaatgaagatgaaccagaaaagaagaagcggaaggtggtggcaaagccaaagaag
gtcattggtattattgaccactttaaatctcaggatctgtctggtgtcacaaaagagtct
agcatgtttgaagatgtggagttctgcatcatgaatggaagtgaggagcaccccaaggca
gacttggagaaaggagtagtgaaatgtggtggaaatgtagtccagaatccaagtcaggac
acttactgtgtgattgcaggtgtggtgaacatgagggtaaagaacctgatttcctgcaac
cagcatgatgtggtctgggctccctggctgctggagtgtttggagaagaagcaatttgtg
ccatggcaaccccgtcacatgattcatatgtcgccatccacacagcagcactttgccaag
gagtatgacaagtttggggacagttactatgctgacaccaatgagcaggagttgaaggag
gttttctctagggttgatatcaaggataaagagatgccatccattgccaatgtggagtca
cagtatgccttggatgacttgcctaccaacatgttcagaccattccgagtttatttagac
cgctgcaccgaaattggagatcccaggagcctcatatgcgggacttgcttggacatacgg
gctctggagtttcggttccatgggggaacagtggtgtctgagctgacagaaggggtcact
catgttatcgttgctgaggagactcgactcctcgatttcagaacactgagaaggctgttt
gccaaaaagtttaaaattgtgagagaatcctgggtgacagactgtattaaagcaggacat
ttactgaatgacaatgaataccttgtgtaa

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