KEGG   Scleropages formosus (Asian bonytongue): 108934846Help
Entry
108934846         CDS       T04919                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Brite
Enzymes [BR:sfm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108934846 (hdac6)
Protein phosphatases and associated proteins [BR:sfm01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108934846 (hdac6)
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108934846 (hdac6)
Chromosome [BR:sfm03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     108934846 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 1106 aa AA seqDB search
MDSTPDPSGSKSPRGSTHSSRSPDSAPKKKSTKPSSKKSNLKEVRKKGRMDRSRGEEEMS
NQLKSLDLHGKPRPTGTGLVFSDIFTHHRCLWDSCHSENPERVVTILEKVKQEGLFSRCV
EVEARSAVEEDLLLVHKREYVELMKSTQNMTESKLRTLSDTYDSVYLHPESFLCATMAVG
SILQLVDKVMSSELQNGFCVVRPPGHHAHVDMANGYCLFNNLAIAARYAQKQYGLERVLI
VDWDVHHGQGIQYIFQEDPSVLYFSVHRYEEGTFWPHLPESDSSAVGTGAGKGYNINLPW
NKIKMADGDYIAAFQQLLLPVAYEFEPQLVLVAAGFDSVVGDPKGEMSTSPQCFAVLTHL
LQGLAQGRLVLALEGGYNLESTAEGVCACLRSLLGDPCPQLNAPVTPCESALKSISQTIS
SLYPFWTSLQILEGGPLPGGHATPTAMLQKPHQCPWESASPLTGLVYDERMMEHHNMWDS
HHPELPQRISRIFSRHEDLGLVCRCHRIPARLATEEELALCHSLEHIAKIKSSEEMKPRD
LHKLGGEYNSIYISPESYKCALLAAGSCFNSAQAILTGQVKNAVAIVRPPGHHAERDIAC
GFCLFNNAALTARYAQKLAKTPLRVLILDWDVHHGNGIQHVFEEDDSVLYISLHRYDNGQ
IFPFSEDANYDRVGRGKGLGFNVNIPWSGSKMGDSEYLAAFHMVVMPIARQFDPELVLVS
AGFDAARGDPLGGYKVTPEGYAHMTRLLMSLAGGRVMLILEGGYNLTSISDSMSMCTSML
LGDTPPSLSQLLPPHPEAALIINRVLHTHAPYWSGLRIQIPEYLPSSVPSHKQKNKRPSA
GRGKNPKQATPAGSPAQRSLPVTPGPVAGGSPEKDEELEGIAQGLRSLDLDTVSSSSSPT
SVPVGGGRRKVKPKPQDSPAPQVHVTPEKKENEDNSLQHDKTGVMPVKESALDTVATGDV
QTGELGEASGWTKSVEHQTVFELFSRGQDIEGGTLYVVDPLPWCPHLEVVRPVPPGGIDV
FLPCEDCGTDTENWICLVCYKVFCGRYVNQHMVSHGQVLEHPLVLSFSDLSVWCYRCESY
VHNKVLHEAKNAAHQMKFGEDIPCVP
NT seq 3321 nt NT seq  +upstreamnt  +downstreamnt
atggattctacacctgatccctcagggtcaaaatcaccaagaggctccacccattcatcc
agatcaccagactctgcacccaaaaagaagagcaccaagcctagcagcaaaaaatctaac
ctcaaagaggttcgcaagaaaggcaggatggatcgaagccgaggagaagaagaaatgagt
aatcaactgaaaagcttggacctgcatggtaaaccaaggcccacggggacaggcctggtt
ttcagtgacatcttcactcaccaccgctgcctctgggacagctgccattctgagaatccg
gagcgagtagtaactatcctggagaaggtgaaacaagaagggctcttctcacgctgtgtg
gaggttgaggcaaggagtgctgttgaggaagatcttctgttggtgcacaaaagagaatat
gttgaattgatgaagtccacacagaacatgacggaaagcaagctcaggactctctctgat
acttacgactctgtctacctgcacccagaatctttcctctgtgccactatggcggttggc
tccatcctgcaacttgtcgacaaggtgatgtcgtcagagttacaaaatggattttgtgtt
gtcagacctccgggtcaccatgcacacgttgacatggcgaatggttactgcttgttcaac
aacctggccattgcagcacgttatgcacagaaacagtatggccttgagcgggttctgatc
gtggactgggatgtgcatcacggccaggggatccagtacatcttccaggaagatcccagt
gtgctgtacttctcagtgcacagatatgaggaaggcacattctggccacatctgcccgag
tccgacagcagtgcggtgggcacaggggcaggcaagggttataacatcaacctaccttgg
aacaagattaaaatggcagatggggattacattgcagcctttcagcaactgctgctgcct
gtggcatatgagtttgagcctcagttggtgcttgtagcagctggatttgattctgtggtg
ggggatcccaaaggagagatgtctaccagtccgcagtgtttcgctgtgctgacccacctg
ttacagggcctggcccagggcaggcttgtgctggccctggaggggggatacaacctggag
tcaactgctgaaggagtgtgtgcttgcttgcggtcactgcttggggatccctgcccccaa
cttaatgcaccagtaaccccctgtgagagtgcactgaagtccatctcccagaccatctcc
tcactttatcccttctggaccagtctgcagatactggagggtggccctcttcccgggggt
cacgctacacccacagccatgctgcagaagccccatcagtgtccatgggaaagtgcatca
ccgctcacgggactggtatatgatgagaggatgatggagcaccacaacatgtgggacagc
caccatcctgagctcccacagaggatttctcgcattttctcccgtcatgaagacctgggc
ctggtctgtcgttgccatcggataccagcacgccttgcaacagaagaggagttagcattg
tgccatagcttggagcacattgccaagataaagtcatcagaggaaatgaagcccagagac
ttacacaagcttgggggcgagtacaactccatctacattagccctgagagctacaaatgt
gccctgttggctgctgggtcatgctttaactctgcccaggccatcctgactggacaggtg
aagaacgccgtggcgattgtgcggccaccaggccaccatgccgaaagggacattgcctgt
ggcttctgtttattcaacaatgcagcactgactgctcgctatgcccagaaacttgccaag
acaccccttagggtcctcatccttgactgggacgtccaccacggcaatggcatccaacac
gtctttgaggaggacgatagtgtgctttatatttcactgcaccgctatgacaatggccag
atttttcccttctctgaagacgccaactatgacagggtgggccggggcaaggggctcggc
ttcaacgtcaacattccctggagtggcagcaagatgggtgactctgagtacctggctgca
ttccatatggtggtgatgcccattgctagacagtttgaccctgagctggtgctggtgtca
gcaggttttgacgccgcacggggtgaccccctaggaggctacaaggtcactccagaaggc
tacgctcacatgacacgcctgctaatgagtctggccggtgggagagttatgctcatactg
gagggaggatacaatctgacttccatctcagactccatgtcaatgtgtaccagcatgctc
ctaggtgacacccctccatcgctgtctcagctgcttcccccgcatcctgaagctgccctt
atcatcaaccgtgtcttacatacacatgccccctattggagcggcctgagaatacaaatt
ccggagtacctgccttcgtctgtgccatcccacaaacagaagaataaacgcccttcagct
ggcagaggcaagaacccaaaacaggcgaccccagcaggaagtcctgcacagcgatccctg
cctgtgaccccggggccagtggccggggggagcccagaaaaggatgaggagctggagggc
attgcacagggactgcggtctttggaccttgacaccgtatcctccagctccagtccaact
tcagtacctgtaggggggggaaggcggaaggtgaagcctaaaccacaggacagtccagcc
ccccaggttcacgtgacaccagagaagaaagagaatgaagataacagcctccaacatgac
aagacaggtgtaatgccagtcaaagaatcagctttagatactgttgctacgggagacgtt
cagactggagaactgggggaggcgtctggatggacaaagtcagtggaacatcagactgtc
tttgagcttttcagcagaggccaggatatagaagggggcacgctgtatgttgtggatccc
ttaccctggtgcccacacctggaggtagtccggcctgtgccccctggggggatagacgtc
ttcctgccctgtgaggactgtgggacagataccgagaactggatctgtctagtgtgctat
aaggtgttctgtggccgctatgtgaaccagcacatggtttcccacggccaggtcttggaa
caccctttggtcctcagcttctcagatctctctgtgtggtgctacagatgcgagtcttat
gtccacaacaaggtgctacatgaagccaaaaatgcagcccatcagatgaagtttggagaa
gatattccctgtgttccctaa

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