Shigella flexneri NCTC1 (serotype 2a): NCTC1_00341
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Entry
NCTC1_00341 CDS
T03751
Symbol
rdgC
Name
(GenBank) Nonspecific DNA binding protein,Recombination-associated protein rdgC,recombination associated protein,Putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_00341 (rdgC)
DNA repair and recombination proteins [BR:
sft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC1_00341 (rdgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
SRPRB
Motif
Other DBs
NCBI-ProteinID:
CDX05622
LinkDB
All DBs
Position
1:complement(337774..338751)
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AA seq
325 aa
AA seq
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MQGRRQFVIMPAKFNDKAVEIIMLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQ
DMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARK
LKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWLDTVNGLIMVDCASAQKAEDTLALLRKSL
GSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDAD
FILMTGELAALIQNLIEGLGGEAQR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggccgccgacaattcgttatcatgcccgctaaatttaacgacaaggccgtggaa
attatcatgctgtggttcaaaaatttaatggtttaccgtcttagccgcgagatttcgctg
cgtgcagaagagatggaaaaacagctagcctcgatggcatttaccccatgcggcagccag
gacatggcgaagatgggctgggttcctccgatgggatcgcacagcgatgcgttaacgcac
gttgccaatggtcaaattgttatctgcgcgcgcaaagaagaaaaaatcctcccgtctccg
gtgattaaacaggcgctggaagcgaaaatcgccaaactggaagcggaacaggcgcgtaag
ctgaagaaaaccgaaaaagattcgctgaaagacgaagtgctgcactctctgctgccgcgt
gctttcagccgttttagccagacaatgatgtggctcgacacggttaacggtttgattatg
gtggactgcgccagtgcccaaaaagcggaagatacgctggcattactgcgtaaaagcctg
gggtcgttaccggttgtaccattgagcatggaaaacccgattgaactgacgctgaccgaa
tgggttcgctccggtagtgcggcacagggcttccagctgcttgatgaagccgagctgaaa
tcgttgctggaagatggcggcgtgatccgcgcgaagaaacaagatctgaccagcgaagag
atcaccaatcacattgaagccggaaaagtggtgactaaactggcgctcgactggcagcag
cgcattcagtttgtgatgtgcgacgatggttcgctcaagcgtcttaagttctgcgacgag
ctgcgcgatcaaaacgaagatatcgaccgtgaagatttcgcccagcgttttgatgccgat
ttcatcctgatgactggtgaactggcagcgttaattcaaaacctgattgaaggattaggt
ggcgaagcacaacgttaa
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