Syntrophobacter fumaroxidans: Sfum_2209
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Entry
Sfum_2209 CDS
T00418
Name
(GenBank) response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
sfu
Syntrophobacter fumaroxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
Response_reg
PAS_4
PAS_3
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ABK17891
UniProt:
A0LKD9
LinkDB
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Position
2707608..2710142
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AA seq
844 aa
AA seq
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MSDRVLPYLPDDISNKQIPILVVDDLRDNLDLMEALLVSEGFEVVHLIPSGQEALEFLET
HRDIGVILMDMMMPGIDGHEMCRRITTHESTRHIPVIIVTGGALRHNEAVQKSFAAGAVD
FVTKPINEVELFMRIHSALALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADG
RLLLINRRLCEMLGFQERELIESSFPDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVH
KDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDITERKNFEDNLRLSATVFEGSTEAIIITD
ARANILRVNSAFTAMTGYADHEVVGKNPRLLKSGNHHEEFYRAMWATLSSTGQWQGEIWN
RRKNGDIFPAWLTLCAVRNSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRA
RFHDRLTHALARAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRES
DTLARWGGDEFIILLESIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRD
GEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHY
QPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRK
WQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAV
ATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSII
SLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFLVNPSGLNLSD
LFEQ
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagggtcctcccatatttgcccgacgatatctccaataagcagatccccatc
ctcgtggtggacgaccttcgggacaacctcgatctcatggaagccctgctggtcagcgaa
ggattcgaagtcgttcatttgatcccctcgggccaggaggcgctggagttcctggaaacg
caccgcgacatcggcgtcatactgatggacatgatgatgcccgggatcgacggtcatgaa
atgtgccggcgaatcaccacccacgaatcgacccgccacataccggtcatcatcgtgacg
ggaggggcgttgcggcacaacgaagccgtgcagaaaagcttcgccgcgggagccgtcgat
ttcgtcaccaagcccatcaacgaagtcgaattgttcatgcgcatccactccgcgctggcc
ctttacagggaacgcgtgattcgccaccacaaaacccgcgagctgcgggagagcgaagaa
aaattccgggtcaccttcgaccaggcaccggtcggcatcgcccatgtcaatgcggacggc
cgtcttctgctcatcaaccggcgcctgtgcgaaatgctcgggttccaggaacgggagctg
atcgagtcctccttcccggacctctgcgtacccgagaacagggacgttcacgaacgcgag
ctgaaaaagtccgtcgaacaaggactcgaatatcacggcttcgaaattcccctggtccat
aaggacggcaggatcatctggaccaagctcaccctttctcccatgaaagacgcggcgggc
gtccccaagtacttcatacacattgtggaagacatcaccgagcgcaagaatttcgaggac
aatctccgcctgtccgccaccgtgttcgaggggagcacggaagccatcatcataaccgac
gcccgggccaacatactcagggtcaacagcgccttcacggccatgaccgggtatgccgat
cacgaagtggtggggaagaacccacgcctcctgaaatccggaaatcaccacgaggaattc
taccgcgccatgtgggccacgctgagcagcaccgggcagtggcagggcgagatctggaac
cgtcggaaaaacggcgatattttccccgcctggctgaccctgtgcgccgtgcgcaacagc
gaggacaagatcaccaattacgtgggaatctccagggacatcacgctgcgcaaggaagcc
gaagagcgcctcagctaccaggcaagccatgatgccctcaccgggctgcccaaccgggcg
cggtttcacgaccgcctgacccacgccctggcgcgagccggccgcgaccggcacgaattc
gccatcctgttcctcgacctggaccgtttcaaagtcatcaacgacacactggggcacacc
gtgggcgactttctcctgcagggggtcaccaagcggctgctcggaggcacccgggaatcg
gacacccttgcccggtggggcggcgacgagttcatcatcctcctggagagcatccgcgga
gccgaggatgcggccgtggccgcgcgaagaatcctcgacgtcctggccgaacctttcagc
gtccagggccacgaagtgttcgtcagcggcagcatcgggatcagcgtctacccaagggac
ggcgaggacgtccaggccctgctccgatgcgccgacatcgcgatgtacagggccaaggac
agcggcaagaacgactaccagttctacgaatccaccatgagcacgggcgggctcgaacgg
ttgaaactcgaaggcgacttgcgctacgccttgaaacgcaacgaattcgtgctccattac
cagcccagggtcaacatcaacaccggcctgatcgtgggcgccgaagcgttgatccgctgg
gatcttcccgatcgaggcctgctgtggcccctggatttcatccccctggcggaagaaagc
ggcttcatcatccccatcggggagtgggtcctgagaacagcgtgcctgcagtgtaggaaa
tggcaggacgccggggttccgcacccccgggtctccgtgaatctgtccactcaccagttc
aagaaagacaacctcacctcgacggtggatcgaattctcaaggaaacggggctgagcccc
gggctgctcgagctcgagatcacggaaagcgccatgatggaaaacctcgaaaaggccgtc
gcgaccctccagggccttgcggaactcggcgtcaacgtggccatcgacgacttcggcacc
gggtattcgtccctcggttatctcaaacggttccccataggggctctcaagatcgaccag
tcgtttgtccggcacattccttccaatattgacgatacggccatcgccatgtcgatcatc
tccctgggaaagaccctgaacctgaaggtggtggcggaaggagtcgagacccaggagcaa
ctgacggtccttcggaactaccagtgcgacgaagcccagggctacctgttcagtcagccg
gtagatgccgaccgcatgaccgaattcctcgtgaacccgtccgggttgaacctgtccgat
cttttcgagcaatga
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