KEGG   Shigella flexneri 8401 (serotype 5b): SFV_4155
Entry
SFV_4155          CDS       T00377                                 
Symbol
uvrA
Name
(GenBank) excision nuclease subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SFV_4155 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfv03400]
    SFV_4155 (uvrA)
DNA repair and recombination proteins [BR:sfv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SFV_4155 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SFV_4155 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 AAA_21 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: ABF06140
UniProt: Q0SXS5
LinkDB
Position
4288394..4291216
AA seq 940 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccccgcgacaagctcattgtcgtgaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgccgttacgttgaatccctttccgcctac
gcgcggcagtttctgtcactgatggaaaagccggacgtcgatcatattgaggggctttct
cctgccatctcaattgagcagaaatcgacgtctcataacccgcgttctacggtggggaca
atcaccgaaatccacgactatttgcgtttgttgttcgcccgcgtcggcgaaccgcgctgt
ccggaccacgacgtcccgctggcggcgcaaaccgtcagccagatggtggataacgtgctg
tcgcagccggaaggcaagcgtctgatgctgctcgcgccaatcattaaagagcgcaaaggc
gaacacaccaaaacgctggagaacctggcaagccagggttacatccgtgctcgtattgat
ggcgaagtctgcgatctttccgatccgccgaaactggaactgcaaaagaaacataccatt
gaagtggtggttgatcgcttcaaggtgcgtgacgatcttacccaacgtcttgcggagtcg
tttgaaaccgcgctggaactttccggtggtacagcggtagtggcggatatggacgacccg
aaagcggaagagctgctgttctccgccaacttcgcctgcccaatttgcggctacagtatg
cgtgaactggagccgcgactgttttcgtttaacaacccggcaggtgcctgcccgacctgt
gacggccttggcgtacagcaatatttcgatcctgaccgcgtgatccaaaaccccgagctg
tcactggctggcggtgcgatccgtggctgggatcgccgcaacttctattacttccagatg
ctgaaatcgctggcagatcactataagttcgacgtcgaagcgccgtggggcagcctgagc
gcgaacgtgcataaagtggtgttgtacggttctggcaaagaaaacattgaattcaaatac
atgaacgatcgtggcgatacctccatccgtcgtcatccgttcgaaggcgtgctgcacaat
atggagcgccgttataaagagacagaatccagtgcggtacgtgaagaattagccaagttt
atcagcaatcgcccatgcgccagctgcgaagggacgcgtctgcgtcgggaagcgcgccac
gtttatgtcgagaatacgccgctgcctgctatctccgacatgagcatcggtcatgcgatg
gaattcttcaacaatctcaaactcgctggtcagcgggcgaagattgcggaaaaaattctt
aaagagatcggcgatcgcctgaaattcctcgtaaacgtcggcctgaattacctgacactt
tcccgctcggcagaaacactttccggcggtgaagcccagcgtatccgtctggcgagccag
attggtgcgggcctggttggcgttatgtacgtgctggacgagccgtctatcggcctgcac
cagcgcgataacgagcgcctgttgggtacgcttatccatctgcgcgatctcggtaatacc
gtgattgtggtggagcatgacgaagacgcaattcgcgccgctgaccatgtgatcgatatc
ggtcctggtgcgggtgttcacggcggtgaagtggtcgcagaaggtccgctggaagcgatt
atggcggtgcctgaatcgttgaccgggcagtacatgagcggtaaacgcaagattgaagtg
ccgaagaaacgcgttccggcgaatccagaaaaagtgctgaagctgacaggcgcacgcggc
aacaacctgaaggacgtgacgctcacgctgccagtcggtctgtttacctgcatcacaggg
gtttcaggttccggtaaatcgacgctgattaacgacacactgttcccgattgcccaacgc
cagttgaatggtgcgaccatcgccgaaccggcaccgtatcgcgatattcagggactggag
catttcgataaagtgatcgatatcgaccaaagcccaattggtcgtactccacgttctaac
ccggcgacctataccggcgtgtttacgcctgtgcgcgaactgtttgcgggcgtaccggaa
tcccgtgcgcgtggttatacgccaggacgtttcagctttaacgtccgtggcgggcgctgc
gaagcctgtcagggcgacggtgtgatcaaagtggagatgcacttcctgccggatatctac
gtgccgtgcgatcagtgcaaaggtaaacgctataaccgtgaaacgctggaaattaagtac
aaaggcaaaaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgagttcttt
gatgcggtgccagctctggcgcgtaagctgcaaacgttgatggacgttggtctgacgtac
attcgcctggggcagtccgcaaccacactttctggtggtgaagcccagcgcgtgaagctg
gcgcgtgagctgtcaaaacgcggcaccgggcagacgctgtatattctcgacgagccgacc
accggtctgcacttcgccgatattcagcaactcctcgacgtgctgcataaactgcgcgat
cagggcaataccattgtggtgattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgtcgacctgggaccagaaggcggcagtggcggcggcgaaatcctcgtctccggtacg
ccagaaaccgtcgcggagtgcgaagcttcgcatacggcacgcttcctcaagccgatgctg
taa

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