Shigella flexneri 2457T (serotype 2a): S4048
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Entry
S4048 CDS
T00128
Symbol
lpfC
Name
(GenBank) putative long polar fimbriae
KO
K07347
outer membrane usher protein
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
S4048 (lpfC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfx02000
]
S4048 (lpfC)
02044 Secretion system [BR:
sfx02044
]
S4048 (lpfC)
02035 Bacterial motility proteins [BR:
sfx02035
]
S4048 (lpfC)
Transporters [BR:
sfx02000
]
Other transporters
Pores ion channels [TC:
1
]
S4048 (lpfC)
Secretion system [BR:
sfx02044
]
Chaperone-usher system
Type 1 pilus assembly protein
S4048 (lpfC)
Bacterial motility proteins [BR:
sfx02035
]
Pilus system
Fimbrial proteins
S4048 (lpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
AAP19027
UniProt:
A0A0H2W059
LinkDB
All DBs
Position
complement(3940913..3943435)
Genome browser
AA seq
840 aa
AA seq
DB search
MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEINHQSGVDIRQFNRANLMPPGVYSV
DIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDP
APRIEGSSWQFDSDKLQLNISIHQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLR
SDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIM
IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQ
SAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGLTDVDVSVGE
LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVTHA
RANFSHDDTETGQSYRFLYSKLFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE
TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWS
YSNTARQGTGNNHASDNTSEQIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSG
TALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGIL
AHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD
NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDA
SLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSFSTPESESGLIEQGVTCH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaccagaatagtggttggcctcacggcagggacgtgtctgattttctcgcaa
aacctgatggccgaggtcagtgtattcaatccggcgcttctggaaatcaaccatcaatcc
ggagtcgatattcgccagtttaatcgggcaaacctgatgcccccaggtgtttatagcgtt
gatatttttatcaacggtaaaatgtttgaacgtcaggatgtgacatttgttcaggataat
ccagatgctgatctgcacgcttgctttattgccattaaaaaaacactgtcctcctttggc
ataaaagttgatgcgctcaaatcgttcaatgatgtggatgagacggtttgcctcgatcct
gctccacgtattgaaggctcatcctggcagtttgacagtgataaattgcagctgaatata
tccattcaccaaatctacatggacgcgatggcttatgattacatcagccccacgcgttgg
gatgaggggattaatgcgctcaccatcaactacgatttttctggttcacatacactacgt
tcagattatggttcacaagagacagataccagttatctcaatctgcgcaatggactgaat
attggaccgtggcggctacgtaattacagtactttaaacaccagcgatggccgtgcggaa
tacaactccattagtacctggatacagcgcgatattgccgcgttaagaagccagattatg
attggtgatacgtggacggcgagcgatattttcgacagtacgcaaattcgcggcgcgcgt
ttgtatactgataacgatatgctacccgccagccagaatggctttgctcctgtggttcgt
gggattgcaaagtccaacgccaccgtcatcattcggcagaatggctacgtgatttatcag
tcagccgttccacaaggtgcttttgagatcaccgatctcaacaccgcaagtacaggtggc
gatttggacgtaaccatcaaagaagaagacggtagcgaacaacgattcacccaaccttat
gcttcattggcgattcttaaacgtgaaggtctgacagatgttgatgtcagcgtgggtgaa
ttgcgcgatgaagacggatttacaccggacgtccttcaggcgcaaatacttcatggtttt
tcccacgggatcactttatatggaggtatgcaggctgctgaaaattatggttctgcagct
ctgggtgtcggtaaagatcttggcgctttgggcgcaatttctttcgatgtgacacatgct
cgtgcgaattttagccatgatgatacagaaacgggtcagtcatatcgctttctctattca
aaactatttgacgacacagacactagcttgcgcctggttggctatcgttactccaccgag
ggctactataccctcaatgagtgggcatcgcggcgcaacagccctgaagacttttgggaa
acaggtaaccgacgtagtcgcgtggagggaacgctaacgcagtcgttggggagagattat
ggcaatttatacctgacattaagccggcaacaatactggcataccgatgatgtcgaacga
ttaatgcaatttggctacagcagtagctggaagcgtctctcgtggaacgtctcctggagt
tattccaatactgccagacaggggacggggaacaaccatgccagtgataacaccagtgag
cagatctacatgctctctttatctgttcctttatcgggctggtggggtaatagttacgcc
acctattctgtttcgcaaaacgataattccggtagctcacatcaactcggactcagcggt
acggcgctggaaagaaataacctttcatggaatttaatgcagtcctataacagtcatgat
gatgaggttggcggtaatatgtccctgacctatgatggctcttatggcacggtgaacggc
agctataactacagccaaaattcccagaggctgaattatggtatcagagggggaattctg
gcacacagcgaaggggtaacgttaagtcaggagttaggtgaaactattgctcttgttaaa
gcacctggggccgccgggttagaaatagataatatgcgcggtgctgcgacggactggcgc
ggctatacggtcaagacacagctaaacccttatgatgaaaatcgggtagcaatcagcgat
aactatttctcgaagtcgaatatagaacttgataataccgtcgttacgatggttcccacg
cgtggtgcagtggttaaagcggagtttgtgactcatgtgggttatcgcgttctcttcaga
gtgttaaatgcaaatggtaaaccggtaccttttggagccattgctgcgatacaagatgca
agtttggcagattcaggaattgtcggtgaccgtggcgaactttatctttctggtctacca
gaaaaaggacaggttacgttatcctggggagaaaacgcctcaacaaaatgcatcttcaat
tattcattttcgacaccagaaagtgagagcggattaattgaacagggtgtgacatgtcat
taa
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