KEGG   Streptomyces globisporus: WQO_24475Help
Entry
WQO_24475         CDS       T04209                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sgb  Streptomyces globisporus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgb00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    WQO_24475
Enzymes [BR:sgb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     WQO_24475
DNA repair and recombination proteins [BR:sgb03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     WQO_24475
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5518463..5519353)
Genome map
AA seq 296 aa AA seqDB search
MTPITEVEGRRVSLSNLDKVLYPATGTTKGEVLHYYAATVGSVILPHLADRPVSFLRYPD
GPGGQLFFTKNPPPGTPAWVETAPVPRSEDQGARQVVVRDLASLMWAANLVVEFHTPQWR
TGAPGVADRMVFDLDPGPPATVVECCAVALWLRERLADDGLAAYGKTSGSKGLHLLVPLE
PTPSGEVSAYAKRLAMEAEEALPALALHRMKRALRPGKVFVDFSQNSASKTTATPYTLRA
RPEPTVSAPVTWDEITGCREAGALVFRAGDMAARLDRHGDLLAPLNDPERAHPLPA
NT seq 891 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcaccgaggtggaggggcgacgggtctcgctcagcaatctcgacaaggtc
ctgtatccggccacgggaacgaccaagggcgaggtgctgcactactacgcggccaccgtg
ggcagcgtgatcctgccccacctggccgaccgccccgtgtccttcctgcggtatccggac
gggccgggcggccagctcttcttcaccaagaatccgccaccgggtacacccgcctgggtg
gagacggccccggtcccccggagcgaggaccagggggcgcgacaggtggtcgtgcgcgat
ctggcctcgttgatgtgggcggcgaacctggtggtggagttccacaccccgcagtggcgc
acgggggcgccgggggtcgccgaccggatggtcttcgacctggaccccggcccccccgcg
accgtcgtggagtgctgcgcggtggcgctctggctgcgggagcggctcgcggacgacggg
ctggcggcgtacgggaagacgtccgggtccaaggggctgcatctgctggttccgctggag
cccacgccgtccggcgaggtgtccgcgtacgcgaagcggctcgccatggaggcggaggag
gccctgccggctcttgccctgcaccggatgaagcgcgccctgcggccgggcaaggtgttc
gtcgacttcagccagaactccgcgtcgaagacgaccgccacgccctacaccctgcgcgcc
cggcccgagcccaccgtctcggcccccgtcacctgggacgagatcacggggtgccgggag
gccggggccctggtgttccgcgccggggacatggccgcccggctggaccggcacggcgat
ctgctcgccccgctgaacgacccggaacgggcgcatccgctgcccgcgtga

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