Sinocyclocheilus grahami (golden-line barbel): 107554269
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Entry
107554269 CDS
T04918
Name
(RefSeq) transcription factor RelB-like isoform X1
KO
K09253
transcription factor RelB
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107554269
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107554269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107554269
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107554269
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
107554269
NCBI-ProteinID:
XP_016092221
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MTSSFFTPRRVIVIRCLHSVSVLSAHASLPHTKESQAHTLLSASHFLIGWFIAQLCELPV
SSPCFFWLFSAALCNPYILDQTPTAQTDGMAPMHSMRGQKVASQRRGQSSVAPQRLHPQQ
TGTEYLERFLEKPKLVVVEQPKERGMRFRYECEGRSAGSILGACSTDSSKTLPAIEIQGP
IDNIKKVIVTVSLVTKDIPYRPHPHCLVGKDCADGICVIHINPHSARRHSFANLGIQCVR
RKELDASLQKRRNKNIDPFNTGHSKSIEDMDMNVVRLCFQCELELKDGDRIPLAPVVSNP
IYDKKATTTAELKINRLNVVRGPCTGKTEIYMLCDKVQKDDIDIIFSKDDWEAKAEFAQT
DVHRQIAIVFKSPPFREQNVTEEVEVSVCLRRVSDRMDSEPVMFTYVPDNADPYGVNRKR
KIKSDVKFSEPCSVPQDQDIVNELTMPQHFEDQFYTPPDCNVPNASMAVPVMDGGNHMPS
QVMEEIHYNEDFKQEDGCVSLDPDTLDTVLQGISQCLASFRPDQSQQGSDQLLNQLFFPG
NLNFGLDGADTKLNVNQPMMNMSSINDVHFSQMVNENQAYPADLENIEGLIFSTVKNEND
LGH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaagcttttttactcccagaagggtgattgtaattcgatgcctacattcagtt
agcgttctctccgctcatgcttctctcccgcatacaaaagagagtcaggcacataccctc
ctctctgcttctcactttctcattggctggtttatcgcccagctatgtgagcttcctgtt
tcttcaccatgcttcttctggctcttctcagcggctctttgtaacccgtacatccttgac
cagaccccaacggcgcaaactgatggtatggcaccaatgcattccatgcgaggccaaaaa
gtggcatctcagcgacgtggacagtcatctgtagctccccagagacttcatcctcagcag
actggaacagaatatctggagcgcttcctggaaaagccaaagctggtggtggtggagcag
ccgaaggagcgcggcatgcggtttcgctatgagtgtgagggacgatccgcgggcagcata
cttggagcctgcagcactgactccagcaagacgctgcctgccattgaaattcaaggcccc
attgataatatcaagaaagtgatagtcaccgtgtctcttgtgacaaaggacatcccgtac
cgcccacatccacactgcttggtcgggaaagactgtgcagatggcatctgtgtcatccac
atcaatccccacagcgctcgtcgacacagctttgcgaatctgggcatccagtgtgtgcgg
aggaaggaacttgatgcctcactgcagaagaggaggaataagaatattgatccgtttaac
acgggccactctaagagcattgaggacatggacatgaacgtggtgagactgtgtttccag
tgtgagctggaactaaaggatggagaccgaatcccccttgcccctgtggtttccaatccc
atttatgacaagaaggcgaccacaacagcagagctgaagatcaatcggcttaatgttgtc
agaggcccctgcacaggaaagactgaaatttacatgctctgtgacaaagtgcagaaagat
gacattgacataatcttcagcaaggacgactgggaggccaaggcggagtttgctcagact
gatgtccatcgacaaatcgccatcgtcttcaagtccccacccttcagggagcagaatgta
accgaggaggtggaggtcagcgtgtgtctacgccgcgtgtctgaccggatggacagcgag
ccagtcatgttcacctatgttccagacaacgcagatccctacggagtgaaccgcaagagg
aaaattaaatctgatgtgaagttcagcgagccatgcagcgttcctcaagatcaagacatt
gtgaacgaactcaccatgccacaacattttgaggaccaattctacacccctcccgattgt
aacgttcccaatgcttccatggcagtccctgttatggatggaggcaatcacatgccatcc
caggttatggaggaaattcattataatgaagacttcaaacaagaggacggttgtgttagc
ctggacccagacactttagatactgtcctccaaggcatttcccaatgccttgccagcttc
agaccagaccaatcccagcaaggttcagaccagcttcttaatcagttgttttttcctggc
aatctcaactttggtttagatggcgcagatacgaaattgaacgtcaatcaacctatgatg
aacatgtcgtctataaacgacgtgcacttcagtcagatggtgaatgagaatcaggcctat
ccagcagatctggagaacatcgaaggcctcattttctccactgtgaagaacgagaatgac
ctgggccactga
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